Query= MSMg01no335_f01.b1 MSMg01no335_f01.b1 CHROMAT_FILE:
MSMg01no335_f01.b1 PHD_FILE: MSMg01no335_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:02 2005
(633 letters)
>mm_chr3_127778307_127779339
Length = 1033
Score = 712 bits (368), Expect = 0.0
Identities = 380/384 (98%)
Strand = Plus / Minus
Query: 250 tatgctctagaaagctgtcttgagcataatttaggctgtcagtttgtaatccataaattg 309
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1033 tatgctctagaaagctgtcttgagcagaacttaggctgtcagtttgtaatccataaattg 974
Query: 310 acttcaagttttgttttgtttttcccctgatgctcacaaacaccccttctctcaggaacc 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 acttcaagttttgttttgtttttcccctgatgctcacaaacaccccttctctcaggaacc 914
Query: 370 cctctccaagcagagactagtccttagaaggcaggacaaattttggggtcaaaggttttg 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 cctctccaagcagagactagtccttagaaggcaggacaaattttggggtcaaaggttttg 854
Query: 430 ttggtgagttggtgtcctggataatgactttctagctgtcattcattgttttcatgtatt 489
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ttggtgagttggtgtcctgaataatgactttctagctgtcattcattgttttcatgtatt 794
Query: 490 tggcaaacatgtgatcatagaagcaagcacagaaatttacagcataaacactatgtagcc 549
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 793 tggcaaacatgtgatcatagaagcaagcacggaaatttacagcataaacactatgtagcc 734
Query: 550 agtgtccttgcggttaaaatgcttagggtaaaggcttactcttctcattatgcctttgtc 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agtgtccttgcggttaaaatgcttagggtaaaggcttactcttctcattatgcctttgtc 674
Query: 610 tttgatttctttattttctgaata 633
||||||||||||||||||||||||
Sbjct: 673 tttgatttctttattttctgaata 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_f01.g1 MSMg01no335_f01.g1 CHROMAT_FILE:
MSMg01no335_f01.g1 PHD_FILE: MSMg01no335_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:02 2005
(334 letters)
>mm_chr3_127602987_127603719
Length = 733
Score = 530 bits (274), Expect = e-155
Identities = 319/334 (95%), Gaps = 1/334 (0%)
Strand = Plus / Plus
Query: 1 ctgccttgacttccttcaatggttcgctgtaacctgtaaggcggaataaaccctttcctc 60
||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 201 ctgccttgacttccttcaatggttcgctgtaacctgtaaggtgaaataaacccttccctc 260
Query: 61 cacaagctgctcttagtcatgctgcaaccatagcaacagaaagcaaaacagaagagcggg 120
|||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaagctgctcttagtcgtgcttccaccatagcaacagaaagcaaaacagaagagcggg 320
Query: 121 acagggttgcagattaaccatcccagaaagccagttgcttgcaaagacaatttgccctac 180
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 321 acagggttgcagattaaccatcccagacagccagtcacttgcaaagacaatttgccctac 380
Query: 181 tcttggaattcattaaaaccctctgttcgctttctttcctctggtgtgttacctttgctc 240
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tcttggaattcattaaa-ccctctgttcactttctttcctctggtgtgttacctttgctc 439
Query: 241 agtggtttgttgatttctttccaggcagcagaaatgttgtcattttgggtggggttgggg 300
|||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 440 agtggtctgttgatttctttccaggcagtagaaatgttgtcatttcgggtggggttgggg 499
Query: 301 agggaaaagcatgagaaaactatcaaactcaagg 334
|||| |||||||||||||||||||||||||||||
Sbjct: 500 aggggaaagcatgagaaaactatcaaactcaagg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 733
Length adjustment: 9
Effective length of query: 325
Effective length of database: 724
Effective search space: 235300
Effective search space used: 235300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
