Query= MSMg01no335_f16.b1 MSMg01no335_f16.b1 CHROMAT_FILE:
MSMg01no335_f16.b1 PHD_FILE: MSMg01no335_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:05 2005
(392 letters)
>mm_chr3_89314576_89315367
Length = 792
Score = 758 bits (392), Expect = 0.0
Identities = 392/392 (100%)
Strand = Plus / Plus
Query: 1 ctgtggcaaggtcttgttctagtctggagaacaggtggcagctgtggtgacttctctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtggcaaggtcttgttctagtctggagaacaggtggcagctgtggtgacttctctgtg 260
Query: 61 gaggggaatctctgctcttacagctgggaacagagtagagtggcagtgtcctagagggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggggaatctctgctcttacagctgggaacagagtagagtggcagtgtcctagagggga 320
Query: 121 gttttagaacagtgatgtcctctggtcttgtggtggtggcaagattaaagtcaatagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttttagaacagtgatgtcctctggtcttgtggtggtggcaagattaaagtcaatagcca 380
Query: 181 tatagtgggagcccattgcagggactgttctgagcccatggctggtaagggagtggctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatagtgggagcccattgcagggactgttctgagcccatggctggtaagggagtggctag 440
Query: 241 cattggtgatgatgagctgttcttggttgttcaaacgagggggcatgtggcaatctgggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattggtgatgatgagctgttcttggttgttcaaacgagggggcatgtggcaatctgggg 500
Query: 301 tacttctgtccacagggtggcgcagtggccaggaacctaacccagaaacacttggactgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacttctgtccacagggtggcgcagtggccaggaacctaacccagaaacacttggactgt 560
Query: 361 ggctgctttgtgtaagtaagaaggctgtggaa 392
||||||||||||||||||||||||||||||||
Sbjct: 561 ggctgctttgtgtaagtaagaaggctgtggaa 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_f16.g1 MSMg01no335_f16.g1 CHROMAT_FILE:
MSMg01no335_f16.g1 PHD_FILE: MSMg01no335_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:05 2005
(442 letters)
>mm_chr3_89484631_89485471
Length = 841
Score = 801 bits (414), Expect = 0.0
Identities = 435/442 (98%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 1 tttaggggccttggtttaggaaccagagtcaaagacaaaatagcagaaaaccctgctaca 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 641 tttaggggccttggtttaggaaccagggtcaaagacaaaatagcagaaaaccctgctaca 582
Query: 61 ggagagagtgcagcctttagaatatctgccaggaacccagggtttgcccagtaggtattt 120
|||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 581 ggagagagtgcagcatttagaatctctgccaggaa-ccagggtttgcccagtaggtgttt 523
Query: 121 cttcttgtgctacccagggaccccatgtatcctgcactcctttggtctttgatggtttaa 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cttcttgtgctacacagggaccccatgtatcctgcactcctttggtctttgatggtttaa 463
Query: 181 gcttcatcctcatgttccacacagcaccacttccttatgccaggtctttttgagccaaag 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 462 gcttcatcctcatgttccacacagcaccacttccttatgccaggtcttcttgagccaaag 403
Query: 241 ggacttctctgaaagttccagcttaagctgtgggtctgggattggttcacttggctagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggacttctctgaaagttccagcttaagctgtgggtctgggattggttcacttggctagtt 343
Query: 301 gatgaggccccctgatggtcttaagttggccatgcccaccacagatcagggagcaccgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gatgaggccccctgatggtcttaagttggccatgcccaccacagatcagggagcaccgta 283
Query: 361 tagtgggagaagggaggaaggtgacttcactaaagaaatctgtgtctattgccatccaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tagtgggagaagggaggaaggtgacttcactaaagaaatctgtgtctattgccatccaga 223
Query: 421 gggtctggggaaggtgatgtgg 442
||||||||||||||||||||||
Sbjct: 222 gggtctggggaaggtgatgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 841
Length adjustment: 9
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
