ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTACCTGACGAATACCAAATGGCTGTGAAGAATCTGAAAAAATTGTTC
AAATTTTAACCATCAGGGAAATGCAAATCAAACCAACCCTGAGATTCCAC
TCCTCTCCAGTCAAAATGGCTAAGATAAAAAATTCAGGTGACAGCAGATG
CTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATT
GCAAACTTGTACAACCACTCTGGACATCAGTCTGGCGGTTCCTCAGAAAA
TTGGACATAGTACTACTGGAGGATCCCGCAATACCTCTCCTGGGCATATA
TCCAGAAGATGATCCAACTGGTAAGAAGGACACCTGCTCCACTATGTTCA
TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAAAACCGAGATGCCCC
TCAACAGAATGGATTGGATACAGAAAATATGGTACATTTACACACTGGAG
TACTACTCAACTATTAAAATGAATGAATTTATGAAATTCCTAGGCAAATG
CGTGGACCTGGAGGGTATCATCCTGAGTGATGTATCCCAATCAGAAAAGA
ACTCTCACGGTATGTACTCCCTGATAGTGGAATTAGCCCAGAAACTTAAA
ATACCCAAGAATTGTCCAACTACCTGAAATCGGATAAAAACTAAAACCCC
ACTGGGGGACCCCTTTTCCCTCTCCCCAAAATTCGGACAAACATCCCTCG
CAAGG

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATAAAATCTATGTAAATTTAAGAATTTT
TGAAGTTAATAAAACTATGATCAAAGCCTTGATGATGTACCTTTGGTTGA
TAAAAGACAGGGTTCAGGCTCTCTAGTTGGGAGAAGGGTAAAACATGAGA
GGAAGAAGAAATAATGATTAGAGAGGAAAAGGCTAAAGAATGATGAGAAA
GGAGAAAAAAGAAAAGAAGAAAAAATGATGAGAATCTTCAGGAAAGAGAG
GGAGTACCTGAACTGACAGCTTGAATCTACTACTGACCCTGAGTCATTAT
TGAATCAGCTACAATCCCATTTCTGCCTTTCTCAAGAACCTTGTCATGCT
GAGGATGGACCTCAGCACTGGGTGATATATAGATATAGAGAATCTTGTAG
CTATATGGATAATTAAACCTAAAGAAACCCGGACCAAAACTTGGATATAT
CTTGATAAATCTATTGATTGCTTTCCTTATTAGCCTGCATAAAACCTCTC
AGAAATATGAAATCTCACAATCATGTAGGAAGTGTTCAAGTGAAAACCAT
TTTTGGCCCCCCCAAACCCAAATCTGAGGGGGTGGGTGGCTTCTCCCGTA
GGCCATTTTTTTCTTCCCTTAAATTAACCCTAGACAATTACTCTAACTTG
GTTTCTAACCTTTTTGGTCCTTTTTCCCCTAACTTCTTTTCCCCTTTTCT
CTACCATTACATTTTCCG

Query= MSMg01no341_f11.g1 MSMg01no341_f11.g1 CHROMAT_FILE:
MSMg01no341_f11.g1 PHD_FILE: MSMg01no341_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:34 2005
         (443 letters)



>mm_chr3_47320506_47321348
          Length = 843

 Score =  851 bits (440), Expect = 0.0
 Identities = 440/440 (100%)
 Strand = Plus / Minus

                                                                       
Query: 4   aaatctatgtaaatttaagaatttttgaagttaataaaactatgatcaaagccttgatga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 aaatctatgtaaatttaagaatttttgaagttaataaaactatgatcaaagccttgatga 784

                                                                       
Query: 64  tgtacctttggttgataaaagacagggttcaggctctctagttgggagaagggtaaaaca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tgtacctttggttgataaaagacagggttcaggctctctagttgggagaagggtaaaaca 724

                                                                       
Query: 124 tgagaggaagaagaaataatgattagagaggaaaaggctaaagaatgatgagaaaggaga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tgagaggaagaagaaataatgattagagaggaaaaggctaaagaatgatgagaaaggaga 664

                                                                       
Query: 184 aaaaagaaaagaagaaaaaatgatgagaatcttcaggaaagagagggagtacctgaactg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aaaaagaaaagaagaaaaaatgatgagaatcttcaggaaagagagggagtacctgaactg 604

                                                                       
Query: 244 acagcttgaatctactactgaccctgagtcattattgaatcagctacaatcccatttctg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 acagcttgaatctactactgaccctgagtcattattgaatcagctacaatcccatttctg 544

                                                                       
Query: 304 cctttctcaagaaccttgtcatgctgaggatggacctcagcactgggtgatatatagata 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cctttctcaagaaccttgtcatgctgaggatggacctcagcactgggtgatatatagata 484

                                                                       
Query: 364 tagagaatcttgtagctatatggataattaaacctaaagaaacccggaccaaaacttgga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tagagaatcttgtagctatatggataattaaacctaaagaaacccggaccaaaacttgga 424

                               
Query: 424 tatatcttgataaatctatt 443
           ||||||||||||||||||||
Sbjct: 423 tatatcttgataaatctatt 404


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)