Query= MSMg01no341_l21.b1 MSMg01no341_l21.b1 CHROMAT_FILE:
MSMg01no341_l21.b1 PHD_FILE: MSMg01no341_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:04 2005
(466 letters)
>mm_chr3_82163977_82164842
Length = 866
Score = 855 bits (442), Expect = 0.0
Identities = 457/462 (98%)
Strand = Plus / Plus
Query: 5 gaattctatatctgtaattgcaaccggggttcacagggttaaacagtggtgcttatgtaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatatctgtaattgcaaccggggttcacagggttaaacagtggtgcttatgtaa 264
Query: 65 tgcttttgtgacacagaccagatctggggctgtaatagagggtatagtaactgattttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcttttgtgacacagaccagatctggggctgtaatagagggtatagtaactgattttct 324
Query: 125 gttgctggtgtaaaacatcatgagcaaaagtgacttagaaaaagagttcatttcggtcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttgctggtgtaaaacatcatgagcaaaagtgacttagaaaaagagttcatttcggtcta 384
Query: 185 cagttcaaaatgatgtgagcgaggtgccttcaacagcagacacacagagcagaaagagac 244
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 cagttcaaaatgatgtgagcgaggtgccttcaacggcagacacacagagcagaaagagac 444
Query: 245 ctggaatgatgtcaaggctgtgacaaagcccagtcccagagaagtacttcatccacaagc 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 ctggaatgatgtcaaggctgtgacaaagcccactcccagagaagtacttcatccacaagc 504
Query: 305 cagtccctcctcaccaaacagtgccatcacgtggggattagatagtcaagttcctgagcc 364
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 505 cagtccctcctcaccaaacagtgccatcacgtggggactaggtagtcaagttcctgagcc 564
Query: 365 tacgggaaacattctcacccaagtgaccataactcacttcctataacccatagactcatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tacgggaaacattctcacccaagtgaccataactcacttcctataacccatagactcatg 624
Query: 425 gccaatgcacattgcattcagtctaactttaaagtcccccat 466
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 625 gccaatgcacaatgcattcagtctaactttaaagtcccccat 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_l21.g1 MSMg01no341_l21.g1 CHROMAT_FILE:
MSMg01no341_l21.g1 PHD_FILE: MSMg01no341_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:04 2005
(387 letters)
>mm_chr3_82206672_82207459
Length = 788
Score = 669 bits (346), Expect = 0.0
Identities = 376/386 (97%), Gaps = 1/386 (0%)
Strand = Plus / Minus
Query: 1 cttattctaagggctttttgaatctttggcttttacctcactgaaactatttctgagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 cttattctaagggctttttgaatctttggcttttacctcactgaaactatttctgagcaa 527
Query: 61 ttaaatagataaaaattaagtttcattatttatatctaactcatgattttctatttttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttaaatagataaaaattaagtttcattatttatatctaactcatgattttctatttttaa 467
Query: 121 tcttgttagcacttacattctccgctaacattgattctgtttcaaaattgggtatatttt 180
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 466 tcttgttagcacttacattctccactaaccttgattctgtttcaaaattgggtatatttt 407
Query: 181 taaattatttccaagttaacttt-ctttaaaataagttgcttatgttggtggtatttgta 239
||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 406 taaattatttccaagctaacttttctttaaaataagttggttatgttggtggtatttgta 347
Query: 240 acttgtggcacatttaatagtcataaattgacagaatgataaatggatgtatgccagttt 299
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 346 acttgtggcacatttaatagtcataaattaacagaatgataaatggatgtatgccagttt 287
Query: 300 gagacagtatggttacacgttgaaaagaactgtgaaagaagtcctcagttaagtcttctt 359
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 286 gagacagtatggttgcacgttgaaaagaactgtgaaagaagtcctcagctaagtcttctt 227
Query: 360 tactcatactcgatacgatttattga 385
||||||||||||| || |||||||||
Sbjct: 226 tactcatactcgaaacaatttattga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 788
Length adjustment: 9
Effective length of query: 378
Effective length of database: 779
Effective search space: 294462
Effective search space used: 294462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
