XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGAATA
TTCCCGATACAATTCACAGACAAAATGAAGCTCATGAAGAAGGAAGACCA
AAGTATGGATATATCTGTACTTCTTAGAAGGAGGATCAAAATTCCCATGG
GGGTGGCGGAGATACAGAGACAAAGTGTGGAGCAGAGACTGAATGAAAGA
AACAATCCAGAGACTGGCCTACCTGGAGATCCATCCCATATACAGACACC
AAATTCAGACAATATTCTGTATGACAAGAAGTGCTTACTCACAGGAGCCT
GCTATAGCATCTCCTGAGAGACTCTGCCAGGGCCTGACAAATACAGAAGT
GGATGCTCTCAGCTAACCCTTGAACTGAGTAGGGGGTCCCCAATGGAGGA
GCTAGACAAAGAATCCAATGAGCAGAAGGAGGTTGCAGCCTCATAGGAGG
AACAACAATATGAACTAACCAGTGCCACCAGAGCTCCTTGGAACTATACC
ACCAACCAAAGAGTACCCATGGAGAGACCCCTGGCTCCAGCTGCATATAT
AGCAGAGGATGGCCTTGTCAGACACCAATGTCAAGAGAGGCCCTTGGGAC
TAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAAATAGTGCTTGAAGT
ATTATTCAGAGCAATTCTACAATATTATGAGATCTTGGGGATATCATCTG
GCCTAAATTACN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCAGACACTCTGTGGATCTGCATAATTTGATAAAAT
CAGGAATCATGAACTAAGGATGAATTATTTCAAATGAAACCAAACCGAAA
GCTCATGTTAGAAGAATAATGGGAGAGCTGGTGAGGATTACCTCTGTAAA
ATGAATTAGAGTGCCATGAGATGCAATATATCAGCGATAAGTCTAGCCTG
CTTCGGAGCCACGAAGATTGCAGAAATGAGTCGGAATCACTTGAGCATCA
CAAATCCTGGGCCATATTTTTTATTCCCAGCCCTGCCCTTTGTGCTGCTT
CCAAGTTTGAAGCTGCAGTTGATTTCAAAGGCAGTGGATGAGAGATAAAG
AGGAATAAGGATTGTTCTACCTCAGCGATTCACGATCCCTCAAAGGCCAC
TGAGTTTCAAAGAAGATGTAGCCCTTGGCATATTAGCAAAATAGATCCCC
AAGTCGTTTTTACCCTGTTTCCATGATAAGCACCCGCTTTTTTATCCCGT
TTACCATGAAAAAGCGAGGTTCCCAGGTCCCGAAAAATGGAATCCCCTTT
CCCCTTTTCCCCTCCCAAGGGAGGCCCTTTTGCCTCCAAATTTATAACTT
TACTGGCCCAAAACCCTTTTTTTTACGGGGATGGTTTTACCTTTTTTACT
AAATGGTACTATAAG

Query= MSMg01no342_j04.g1 MSMg01no342_j04.g1 CHROMAT_FILE:
MSMg01no342_j04.g1 PHD_FILE: MSMg01no342_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:07 2005
         (398 letters)



>mm_chr3_6198103_6198900
          Length = 798

 Score =  762 bits (394), Expect = 0.0
 Identities = 397/398 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagacactctgtggatctgcataatttgataaaatcaggaatcatgaactaaggatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tcagacactctgtggatctgcataatttgataaaatcaggaatcatgaactaaggatgaa 539

                                                                       
Query: 61  ttatttcaaatgaaaccaaaccgaaagctcatgttagaagaataatgggagagctggtga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttatttcaaatgaaaccaaaccgaaagctcatgttagaagaataatgggagagctggtga 479

                                                                       
Query: 121 ggattacctctgtaaaatgaattagagtgccatgagatgcaatatatcagcgataagtct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ggattacctctgtaaaatgaattagagtgccatgagatgcaatatatcagcgataagtct 419

                                                                       
Query: 181 agcctgcttcggagccacgaagattgcagaaatgagtcggaatcacttgagcatcacaaa 240
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 agcctgcttcggagccacggagattgcagaaatgagtcggaatcacttgagcatcacaaa 359

                                                                       
Query: 241 tcctgggccatattttttattcccagccctgccctttgtgctgcttccaagtttgaagct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tcctgggccatattttttattcccagccctgccctttgtgctgcttccaagtttgaagct 299

                                                                       
Query: 301 gcagttgatttcaaaggcagtggatgagagataaagaggaataaggattgttctacctca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gcagttgatttcaaaggcagtggatgagagataaagaggaataaggattgttctacctca 239

                                                 
Query: 361 gcgattcacgatccctcaaaggccactgagtttcaaag 398
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gcgattcacgatccctcaaaggccactgagtttcaaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space:   306921
Effective search space used:   306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)