Query= MSMg01no342_o10.b1 MSMg01no342_o10.b1 CHROMAT_FILE:
MSMg01no342_o10.b1 PHD_FILE: MSMg01no342_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:33 2005
(184 letters)
>mm_chr3_90429153_90429736
Length = 584
Score = 352 bits (182), Expect = e-102
Identities = 182/182 (100%)
Strand = Plus / Plus
Query: 1 agggctcaggggaagggagctcaccactcagtctgtcactggctgttgtttttgctgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggctcaggggaagggagctcaccactcagtctgtcactggctgttgtttttgctgcaa 260
Query: 61 acaataagaacaataattatcaaaagagtgaagccagctgggatggagcaaggtgggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaataagaacaataattatcaaaagagtgaagccagctgggatggagcaaggtgggagg 320
Query: 121 gtgagccccattattgggagatcccgcttatgaggagcatgtggggagagagcaggctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagccccattattgggagatcccgcttatgaggagcatgtggggagagagcaggctgt 380
Query: 181 gg 182
||
Sbjct: 381 gg 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no342_o10.g1 MSMg01no342_o10.g1 CHROMAT_FILE:
MSMg01no342_o10.g1 PHD_FILE: MSMg01no342_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:33 2005
(321 letters)
>mm_chr3_90554145_90554870
Length = 726
Score = 592 bits (306), Expect = e-173
Identities = 320/326 (98%), Gaps = 5/326 (1%)
Strand = Plus / Minus
Query: 1 tctcccctattttcattttaacctcatggagtcttacccccac-gagaagatgatagcta 59
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 526 tctcccctattttcattttaacctcatggagtcttacccccactgagaagatgatagcta 467
Query: 60 aacaacaagcacatccatgcccactgaggaccctcagctggcccagccaacagatgaggg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aacaacaagcacatccatgcccactgaggaccctcagctggcccagccaacagatgaggg 407
Query: 120 cctagttggcttggtctgccttgcctggcatttccatccttcagccttcgatttcagaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cctagttggcttggtctgccttgcctggcatttccatccttcagccttcgatttcagaag 347
Query: 180 ctgtccctcctccaacagctgtcaccgcctccagacttagttctctctgattttagagga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctgtccctcctccaacagctgtcaccgcctccagacttagttctctctgattttagagga 287
Query: 240 aagcccttccctaggagcagagcactgtaactctagtttccca-aaa---aggaacaagc 295
||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||
Sbjct: 286 aagcccttccctaggagcagagcactgtaactctagtttcccagaaatgaagtaacaagc 227
Query: 296 attgatctgaaacaaaagagacgtga 321
||||||||||||||||||||||||||
Sbjct: 226 attgatctgaaacaaaagagacgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 726
Length adjustment: 9
Effective length of query: 312
Effective length of database: 717
Effective search space: 223704
Effective search space used: 223704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
