Query= MSMg01no343_h04.b1 MSMg01no343_h04.b1 CHROMAT_FILE:
MSMg01no343_h04.b1 PHD_FILE: MSMg01no343_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:17 2005
(353 letters)
>mm_chr3_80595194_80595946
Length = 753
Score = 615 bits (318), Expect = e-180
Identities = 339/346 (97%)
Strand = Plus / Plus
Query: 5 gaattcaatctgtgactctccagactgcccttcatttaaacaaatataatttaattaatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatctgtgactctccagactgcccttcatttaaacaaatataatttaattaatt 264
Query: 65 aaacaagagaacgattgggaatctataaagtgcttggttctgtaaagtgctgagatatct 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaacaagagaaagattgggaatctataaagtgcttggttctgtaaagtgctgagatatct 324
Query: 125 ttagattaggaaggtatactaaagtaaacgggtttcagcattctgaggtgtgctacacaa 184
|||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 325 ttagattaagaaggtatactaaagtaaacggttttcagcattctgaggtttgctacacaa 384
Query: 185 taaaggtgatggatgcactcctactcaataccaggaactctaatttgatggtcactcaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaaggtgatggatgcactcctactcaataccaggaactctaatttgatggtcactcaca 444
Query: 245 tttgattgtaatctacattgtatttgtagtagtcccggtggtggattttgttagtctctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgattgtaatctacattgtatttgtagtagtcccggtggtggattttgttagtctctt 504
Query: 305 tgtcagtatgtatcatttgttctgctcaggtgccaaagctctatta 350
|||||||| ||| ||||||||||||||||||| |||||||||||||
Sbjct: 505 tgtcagtaagtaacatttgttctgctcaggtgtcaaagctctatta 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_h04.g1 MSMg01no343_h04.g1 CHROMAT_FILE:
MSMg01no343_h04.g1 PHD_FILE: MSMg01no343_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:17 2005
(370 letters)
>mm_chr3_80761735_80762502
Length = 768
Score = 650 bits (336), Expect = 0.0
Identities = 361/370 (97%), Gaps = 2/370 (0%)
Strand = Plus / Minus
Query: 1 tataagaacacatatttcttaccttgttccattaccgtaaactcaggtcaaagggttcct 60
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 543 tataagaacacacatttcttaccttgttccattaccataaactcaggtcaaagggttcct 484
Query: 61 aacatgctttggatacatcgtttggtacatagacatatccaataattatccagagactac 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 483 aacatgctttggatacatcgtttggtacatagacatatccaataattattcagagactac 424
Query: 121 aggacaaacattatccaatttaacgggaaaaattaaatatagtatccaaatcccttccta 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aggacaaacattatccagtttaacgggaaaaattaaatatagtatccaaatcccttccta 364
Query: 181 caatgaaaatcccaacccccaatatacaattgctagcatttcttcataaatattcaaaga 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 363 caatgaaaatcccaacccccaatatacaattgctagcatatcttcataaatattcaaaga 304
Query: 241 attaatataaataagaaccacaaccagttagatataattctgtcagaaaacagaaaaaga 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 303 attaatataaataagaaccacgaccagttagatataattctgtcagaaaacagaaaaaga 244
Query: 301 agtgtcttagagtcagggttctctagaggaacaaacatggcagaatgtgtgtgtgtgtgt 360
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 243 agtgtctt--agtcagggttctctagaggaacaaacatggcagaatgtatgtgtgtgtgt 186
Query: 361 gtgtgtgtgt 370
||||||||||
Sbjct: 185 gtgtgtgtgt 176
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 768
Length adjustment: 9
Effective length of query: 361
Effective length of database: 759
Effective search space: 273999
Effective search space used: 273999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
