Query= MSMg01no343_i23.b1 MSMg01no343_i23.b1 CHROMAT_FILE:
MSMg01no343_i23.b1 PHD_FILE: MSMg01no343_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:26 2005
(399 letters)
>mm_chr3_43510851_43511651
Length = 801
Score = 712 bits (368), Expect = 0.0
Identities = 389/398 (97%), Gaps = 6/398 (1%)
Strand = Plus / Minus
Query: 6 gaattcagtgaacagttc---acaactcttccccagtgataccactctagttattaattc 62
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gaattcagtgaacag--caaaacaactcttccccagtgataccactctagttattaattc 421
Query: 63 aaagccaggtcgtcattcaggaaatcagatacataagtaacaataagtataaccttcgat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaagccaggtcgtcattcaggaaatcagatacataagtaacaataagtataaccttcgat 361
Query: 123 atatacggattgagaatatattca-gggaacatgagatgagttcaaaagtggactgaaaa 181
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 360 atatatggattgagaatatattcaggggaacatgagatgagttcaaaagtggactgaaaa 301
Query: 182 ggggaacaatgaaaatataatttacataaaaacctatatctaaatatacaataaatgtac 241
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 300 ggggaacaatgaaaatataatttacataaaaacctatatctaaatatacaatgaatgtac 241
Query: 242 aaattggatcttccacctaaaactggcaaagcctgccaagaaccccagaagactctccac 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aaattggatcttccacctaaaactggcaaagcctgccaagaaccccagaagactctccac 181
Query: 302 aacacaggaccttgggatcacctcgggatcactggtgactggaacgcaatatcagctcta 361
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 180 aacacaggaccttgggatcacctcgggatcactggtgactggaatgcaatatcagctcta 121
Query: 362 aagatcaaggagggacttgtgccagcaggaacagggac 399
||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aagatcaaggagggacttgtgccagcaggaacagggac 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 801
Length adjustment: 9
Effective length of query: 390
Effective length of database: 792
Effective search space: 308880
Effective search space used: 308880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_i23.g1 MSMg01no343_i23.g1 CHROMAT_FILE:
MSMg01no343_i23.g1 PHD_FILE: MSMg01no343_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:26 2005
(393 letters)
>mm_chr3_43331998_43332790
Length = 793
Score = 746 bits (386), Expect = 0.0
Identities = 392/394 (99%), Gaps = 1/394 (0%)
Strand = Plus / Plus
Query: 1 tggatacttgattgtaaacaaacacaagagccatcagggtaatatgaaaacattataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggatacttgattgtaaacaaacacaagagccatcagggtaatatgaaaacattataaaa 260
Query: 61 gatattatgcttgtaactcacaatataagataaccaatattatggttttaattttatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatattatgcttgtaactcacaatataagataaccaatattatggttttaattttatgga 320
Query: 121 tgatttttacattgttcatatgatcattaattgtaaataattatttatttaatttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatttttacattgttcatatgatcattaattgtaaataattatttatttaatttctttt 380
Query: 181 tattaaaatacaatatattatatttttctcacataatgtatcctgattatgttttatctt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tattaaaatacaatatattatatttttctcacataatgtatcctgattatgttttacctt 440
Query: 241 ccttttacaccttccaggtcctctctattgttttccaatccagattcattataatctgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttttacaccttccaggtcctctctattgttttccaatccagattcattataatctgtc 500
Query: 301 tgtcatcgtaaataaactattctataagagacagaaataaaaaa-atatatatattaaaa 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tgtcatcgtaaataaactattctataagagacagaaataaaaaatatatatatattaaaa 560
Query: 360 actgtaatacaaaaaataactaaacatttgaaat 393
||||||||||||||||||||||||||||||||||
Sbjct: 561 actgtaatacaaaaaataactaaacatttgaaat 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
