Query= MSMg01no344_f10.b1 MSMg01no344_f10.b1 CHROMAT_FILE:
MSMg01no344_f10.b1 PHD_FILE: MSMg01no344_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:29 2005
(421 letters)
>mm_chr3_35075962_35076782
Length = 821
Score = 731 bits (378), Expect = 0.0
Identities = 411/422 (97%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 1 attctctgatgtgcttt-aaacaggccagcgagctcccttgggtgtctctctatcttggt 59
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 200 attctctgatgtgctttaaaacaggccagcgagctctcttgggtgtctctctatcttggt 259
Query: 60 aatgggaggccccagaatgctagacttctgcagaataaaacactttttgagtttgcatac 119
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 260 aatgggaggccccagaatgctagacttctgcagaataaaacaccttttgagtttgcatac 319
Query: 120 tatttgagtctggggtgtcattgtttggagaatcatgtacccttacagaatagagcccta 179
||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||
Sbjct: 320 tatttgagtctggggtgtcattgtttggagaatcatggacccttgcagaatagtgcccta 379
Query: 180 actacatggcttcctaggactgattcctttttcctttctaccccttttcttcttttctct 239
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 380 actacatggcttcctaggactgcttcctctttcctttctaccccttttcttcttttctct 439
Query: 240 tcttttgataagactagagggatgtttatagaagggatgggagagaaaggaagctatttt 299
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 tcttttgataagactagaggaatgtttagagaagggatgggagagaaaggaagctatttt 499
Query: 300 tcttactagagttaacagaatgtgttattttgtttctgtaaataatctcccctggagata 359
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcttactagagttaagagaatgtgttattttgtttctgtaaataatctcccctggagata 559
Query: 360 gtaaaccatatgcagattcatgtgcagaatctagccataatgtatgtatccatgtaagca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtaaaccatatgcagattcatgtgcagaatctagccataatgtatgtatccatgtaagca 619
Query: 420 aa 421
||
Sbjct: 620 aa 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_f10.g1 MSMg01no344_f10.g1 CHROMAT_FILE:
MSMg01no344_f10.g1 PHD_FILE: MSMg01no344_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:29 2005
(423 letters)
>mm_chr3_35254096_35254918
Length = 823
Score = 764 bits (395), Expect = 0.0
Identities = 416/423 (98%)
Strand = Plus / Minus
Query: 1 ctgcatcaatgcttggaatggattggaaggagaggatggagtttggaactcagaacgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctgcatcaatgcttggaatggattggaaggagaggatggagtttggaactcagaacgtta 564
Query: 61 taaagcagctttatatttgtgctgagaatgggttgaattgttggtattgttatttaaagt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 caaagcagctttatatttgtgctgagaatgggttgaattgttggtattgttatttaaagt 504
Query: 121 aagtataagaataaactggcatgatttgccttgcgggatttacaaaatgcaaaggatcca 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 503 aagtataagaataaactggcatgatttgccttgcgggattaacaaaatgcaaaggatcca 444
Query: 181 gatgatgcttctcagggtatcaactacagccagttgaataagagttgttctagaaagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gatgatgcttctcagggtatcaactacagccagttgaataagagttgttctagaaagact 384
Query: 241 aagatgtccagaacctctggttttgccggccacgcttgtggtagaggaggttagtatgtc 300
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagctgtccagaacctctggttctgccggccacgcttgtggtagaggaggttagtatgtc 324
Query: 301 cttgtggagaatccgtagcaaattggggccctcttctctcagtgcctccttcctccttcc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 323 cttgtggagaatccgtagcaaattggggccctcttctctcagtgcctccttcctgctccc 264
Query: 361 ggggattgacgtctcctagaagaagcttgatgtccttggtttttacgagagtgctttcct 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 ggggattgacgtctcctagaagaagcttgatgtccttgctttttacgagagtgctttcct 204
Query: 421 gat 423
|||
Sbjct: 203 gat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
