Query= MSMg01no344_h16.b1 MSMg01no344_h16.b1 CHROMAT_FILE:
MSMg01no344_h16.b1 PHD_FILE: MSMg01no344_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:40 2005
(477 letters)
>mm_chr3_157889790_157890666
Length = 877
Score = 866 bits (448), Expect = 0.0
Identities = 469/476 (98%), Gaps = 2/476 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttaggc-tattaatggaactagaaaatatcatcctgagtgaggtaacccagtc 62
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ggaattcttaggcaaattaatggaactagaaaatatcatcctgagtgaggtaacccagtc 540
Query: 63 acaaaagactggttttcagtggggaaaccaggaaaggagatacacatttgaaatgtaaat 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 acaaaagactggtttttagtggggaaaccaggaaaggagatacacatttgaaatgtaaat 480
Query: 123 aaagaaaacatctaataattttttaaaaatcactgtggtaatatttgcactctttgaaat 182
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 479 aaagaaaacatctaataatttttaaaaaatcactgtggtaatatttgcactctttgaaat 420
Query: 183 tatatgcaatgtgccacatgcaaacaaaaccttctaaacagtgcacagtacacttctggg 242
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 419 tatatgcaatgtgccacatgcaaacaaaaccttctaaacagtacacagtacacttctggg 360
Query: 243 ttaaatgtaagggctgtg-tatcttaaaggcactggttggtcttccagaaatcctgactt 301
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttaaatgtaagggctgtgttatcttaaaggcactggttggtcttccagaaatcctgactt 300
Query: 302 caatccccagcaaccagatggagggagccaggactccagataaatatgtagcaaaggatg 361
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 299 caatccccagcaaccagatggagagagccaggactccagataaatatgtagcaaaggatg 240
Query: 362 gcctccgctgacattaatgggaggagagggaggcttgatgtcccttcataggaggatgct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gcctccgctgacattaatgggaggagagggaggcttgatgtcccttcataggaggatgct 180
Query: 422 agaagagtgaggcagaagtgggttaatgagtgaaggagcaccctcacagaggcaaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agaagagtgaggcagaagtgggttaatgagtgaaggagcaccctcacagaggcaaa 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_h16.g1 MSMg01no344_h16.g1 CHROMAT_FILE:
MSMg01no344_h16.g1 PHD_FILE: MSMg01no344_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:41 2005
(180 letters)
>mm_chr3_157806625_157807204
Length = 580
Score = 325 bits (168), Expect = 1e-93
Identities = 177/180 (98%)
Strand = Plus / Plus
Query: 1 agggggcttgaagaagacatgggtgggtaagctgaaagtacatgtcctcatttaccccat 60
||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||
Sbjct: 201 agggggcttgaagaagacatgggtggggaagctgaaagtacatgccctcatttaacccat 260
Query: 61 catgaagcacaatgaatatacaccaatggggaaagtggagcacactgtatgccagacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgaagcacaatgaatatacaccaatggggaaagtggagcacactgtatgccagacaac 320
Query: 121 actaggttctaattccttgcttatcagtccatcttggggaagtctccaccttgtgaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actaggttctaattccttgcttatcagtccatcttggggaagtctccaccttgtgaaact 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
