Query= MSMg01no344_i19.b1 MSMg01no344_i19.b1 CHROMAT_FILE:
MSMg01no344_i19.b1 PHD_FILE: MSMg01no344_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:46 2005
(469 letters)
>mm_chr3_56667246_56668113
Length = 868
Score = 891 bits (461), Expect = 0.0
Identities = 467/469 (99%), Gaps = 1/469 (0%)
Strand = Plus / Plus
Query: 1 gcaagagaataaatggcaaaaatctaatttcccttactttcttctataattatatgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaagagaataaatggcaaaaatctaatttcccttactttcttctataattatatgttca 260
Query: 61 actcaaatgaaaagctcgtggtgcttgaaaaagacccaggagtttggcaaagcaggtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcaaatgaaaagctcgtggtgcttgaaaaagacccaggagtttggcaaagcaggtttt 320
Query: 121 ctaatcactttatttgtcaacagagacaaaacttggaccagtacaaatgtctgctgtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaatcactttatttgtcaacagagacaaaacttggaccagtacaaatgtctgctgtatc 380
Query: 181 acttttggggctgctgaaatcctctggctttgaaatattcctgttcttaaggaatgccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttttggggctgctgaaatcctctggctttgaaatattcctgttcttaaggaatgccac 440
Query: 241 ttcctttcagcactgttattttaagatcattttcccacccccatctcacctcacaaatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcctttcagcactgttattttaagatcattttcccacccccatctcacctcacaaatac 500
Query: 301 ctctgaaagtcacaaggagactgttttagagagggaaaaaaaagtcctttccaatggcaa 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ctctgaaagtcacaaggagactgttttagagagggaaaaaaa-gtcctttccaatggcaa 559
Query: 361 cagtatatgagatttcccatatttttatgtttagagcagccttttaaaaaggtaaaacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 560 cagtatatgagatttcccatatttttatgtttagagcagccttttaaaaagataaaacct 619
Query: 421 tgaaaatgtacatgaaagacttaattgaaactatccctaagatgaacag 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgaaaatgtacatgaaagacttaattgaaactatccctaagatgaacag 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 868
Length adjustment: 10
Effective length of query: 459
Effective length of database: 858
Effective search space: 393822
Effective search space used: 393822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_i19.g1 MSMg01no344_i19.g1 CHROMAT_FILE:
MSMg01no344_i19.g1 PHD_FILE: MSMg01no344_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:46 2005
(536 letters)
>mm_chr3_56875483_56876418
Length = 936
Score = 903 bits (467), Expect = 0.0
Identities = 467/467 (100%)
Strand = Plus / Minus
Query: 70 gcttccttcttccatgttgttgtataggcttccatcataagatgtcacccagattaaagg 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 gcttccttcttccatgttgttgtataggcttccatcataagatgtcacccagattaaagg 877
Query: 130 tgagtcttcccaccttaagattcaaattaaaggactttctcccagtctttaagatccaga 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 tgagtcttcccaccttaagattcaaattaaaggactttctcccagtctttaagatccaga 817
Query: 190 tctaaagtgtatgtcttcccacctcaaaataaacaggattgctctcataactgtggcctc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tctaaagtgtatgtcttcccacctcaaaataaacaggattgctctcataactgtggcctc 757
Query: 250 tatttctggattgtagtacacaggaccttagggaatggaaagaaataattccttcaaagt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tatttctggattgtagtacacaggaccttagggaatggaaagaaataattccttcaaagt 697
Query: 310 agataaggaagggcatcagataatttaaatacaggcattcaagctaccatccataacaga 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 agataaggaagggcatcagataatttaaatacaggcattcaagctaccatccataacaga 637
Query: 370 agcttgtctaagactctttataccaactatctgcttctgaaatacttggcattggatttg 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 agcttgtctaagactctttataccaactatctgcttctgaaatacttggcattggatttg 577
Query: 430 cacttctcttcctaaatgtgccatcatggatgtcattgtgtttagtttggtgtttagctc 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cacttctcttcctaaatgtgccatcatggatgtcattgtgtttagtttggtgtttagctc 517
Query: 490 ttattccagctcatgtcaactcttttgtctggctagataatcagaca 536
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttattccagctcatgtcaactcttttgtctggctagataatcagaca 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
