XXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAAGAGGATCCGCGGAATTCT
TTGTTCCGATCTGAGCCCCATTTTTGAATGGGGTTATTTGATTTTCTGAA
GTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTAGAGG
AATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCT
ATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGA
GGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAATA
TGTACTCACTGTATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGA
TATAAGATATAATTTGCTAAACACATGAAACTCAAGAAGAATGAAGACTG
AAGTGTGGACACTAGGCCCCTCCTTATATTTGGGAACAAAACACCCATGG
AAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGTTGGACCATG
TATAGACTGCCATATCCAGGGATCCACCCCATAATCAGCATCCAAATGCT
GACCCCATTGCTTACACTACCTAGATTTTATCGAAAGGATCCAGACGTAT
CTGTCTCCTTGGTAGACTATGGCCGGTGCCCTATAAAACCTTTAATTTGG
ATGCTCTTAGCTTTTTTATCGGATTTTTTCCTCGCGTTTTTCCCTTTGTT
CTCCCCCTTTATAAACGTTCTCCCGGTACTTCCCTTGG

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATAATGATGTGATGAATGTAACTCAGATACT
TACCTTATTTAAAATCCTTTCACAGATTCCATTTGTTATCAAAGAGAGCT
TCATACTACACAGTCAGCACTTTTCATGATTTGACCTGGGTTTCTCTCCT
CTGTCGTGCAGGCGTCACCTCACCCCCCGTTTACTTATGGCCACCACAGA
AACATTGCCCTATTGGCGGCATCCTCCTTAGACCCAGCTGTGCACACTGA
AGCACAGAGATAGGCACTTTCTCTAAAGGACAGTGTTGGCTTGGAAATGC
TGAATTCTAAGTTCTGACCCAATATTCAGACAAACCTGCCAATACGAATG
TGGCTACAGCTTGAAATGGTAACTGTGGTTCACGGACATGCACTGGAGAT
GACCTAATGTCATTGCTTCCCGAGCAACCAGAAAGAGCAAGGTTTGGATT
CCCACTATCCATATGAAGTGAAAGCAGGCATGCTCACCACCTAGAAAGCC
AGCATCCCCCAGAAAAACATGAGCTTCCAGGGCCAAGCAAACTATTCAGA
TTTGTCAGAACAAGGGAGATCCTGGTTCAACAGCTACCTCAACAATACAG
TCCAGAGCCAAACCAACCCTCTAGTTTACNCCCCATATACTAATACCTTT
GTACACATACGTGCAACCTCACCC

Query= MSMg01no346_j14.g1 MSMg01no346_j14.g1 CHROMAT_FILE:
MSMg01no346_j14.g1 PHD_FILE: MSMg01no346_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:20 2005
         (503 letters)



>mm_chr3_139508978_139509880
          Length = 903

 Score =  957 bits (495), Expect = 0.0
 Identities = 501/503 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ataatgatgtgatgaatgtaactcagatacttaccttatttaaaatcctttcacagattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ataatgatgtgatgaatgtaactcagatacttaccttatttaaaatcctttcacagattc 644

                                                                       
Query: 61  catttgttatcaaagagagcttcatactacacagtcagcacttttcatgatttgacctgg 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 643 catttgttatcaaagagagcttcatactacacagtcagcacttttcgtgatttgacctgg 584

                                                                       
Query: 121 gtttctctcctctgtcgtgcaggcgtcacctcaccccccgtttacttatggccaccacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gtttctctcctctgtcgtgcaggcgtcacctcaccccccgtttacttatggccaccacag 524

                                                                       
Query: 181 aaacattgccctattggcggcatcctccttagacccagctgtgcacactgaagcacagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aaacattgccctattggcggcatcctccttagacccagctgtgcacactgaagcacagag 464

                                                                       
Query: 241 ataggcactttctctaaaggacagtgttggcttggaaatgctgaattctaagttctgacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ataggcactttctctaaaggacagtgttggcttggaaatgctgaattctaagttctgacc 404

                                                                       
Query: 301 caatattcagacaaacctgccaatacgaatgtggctacagcttgaaatggtaactgtggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 caatattcagacaaacctgccaatacgaatgtggctacagcttgaaatggtaactgtggt 344

                                                                       
Query: 361 tcacggacatgcactggagatgacctaatgtcattgcttcccgagcaaccagaaagagca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcacggacatgcactggagatgacctaatgtcattgcttcccgagcaaccagaaagagca 284

                                                                       
Query: 421 aggtttggattcccactatccatatgaagtgaaagcaggcatgctcaccacctagaaagc 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 283 aggtttggattcccactatccatatgaagtgaaggcaggcatgctcaccacctagaaagc 224

                                  
Query: 481 cagcatcccccagaaaaacatga 503
           |||||||||||||||||||||||
Sbjct: 223 cagcatcccccagaaaaacatga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space:   440249
Effective search space used:   440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)