CCCCCCACCTCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCAGCATTTCTTTGAGAGAAACTGAATTTTGCCTGGCA
GCTACATTGGTCAATTTAGGTACATTCATCAGTTTAAGTAAGTAGTTAAA
TTAATGAGGGACACACACACTTGAGTGTATAATCATAATTGCATATAGTT
CAGCTCACACAGATTGTTGGACAGAGGTGTCGGAGTGTGTTACAATGTGG
ATTTGTCACACATGGCATAGTATGGCCTGAACATCTGCAAGGGACCCTGA
GATGCTGACACAAAGTGTTGAACACAAGAGCCCTGCCTCAGGGTCCCTCT
CATCCCTGTGCAAGAACGTAGAAGAGAGAGTTGTCGACCTCTCATAAGGG
AACAAATTCAAGTCATAGCAAGTTATTATGTACTTTATAAATGTTGAAAG
AGACGCAATTCAAGCTTCCCAACACAAAGATATGAGAAGTGTTCCTAAGG
AGACAGAAATGCTACTTATTCTGATTTGATTATTACTTGTCTCATATATG
TCTCAGATTATCATGCTCTACCTCATTAGCATGTATAGTTCCTGTATGTC
TACTTTTATTAAGTACTGTATACTTTGTTTAATAGATTAATTCTGGTTGT
TATATGTCCCTTATTTGGATCCGCGTTTGCCCGGTCATACAATTGCTTTT
GGTATCGGTTCGATTTCGTACATTT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGCATTTTGAGAGAATGAACTTGA
CATTACCTGAACTATTCTGAACATGGACTAGAGTCCGTTCAACAGTTTCC
ACCTTTAAACGCGAATTGTCTGCATGGCCATGTTTCCCAAGAGAATCCTG
ATGCAGTGTTCTTGGCCATCAACAACAACATAAATATTTACAATCTTATT
AACTGATCCAGGACATGCAAGGCCAAGTAAAGTCCCTGCCACACAAACAT
GAAAGACGTCCATATCCCCAGAATACAATAGTAGTCAAGTGTGGTGACAA
AGGCTGTGGGTTGACTGCAGGTGGAGCTCATTAGCTAGCTGGGCTAGCCA
GTTGAAGGCCATCAGGTTCAATGATACCCTTTGTCAGAAAACTAGGCAGA
AAGCTATCAAGAAAGACACTTAGAATTGATTTACTGGCCTCTGCACGCAC
GCACATGCTTGTATACAGAATATTTATACATGAATGTATTTATACAGTTC
TACAGACACACATATGCTCATACACGCACAAATAGCTTTCTGAAATATTT
CATCACCTGTCTGTTTTGTACTAAGACACATAGGATTATGTATTAAGCTA
TCAGAAGGCACTAGTAATGATAGAAAGAAATGCAATAATTGCACAAACCA
TGACTTAGTATAGTGCTTATTAACTCTATATTATATAAAGGCCCTGTGTT
CCTTGCGTTGTTATGGAAATN

Query= MSMg01no347_f02.b1 MSMg01no347_f02.b1 CHROMAT_FILE:
MSMg01no347_f02.b1 PHD_FILE: MSMg01no347_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:15 2005
         (398 letters)



>mm_chr3_27283113_27283910
          Length = 798

 Score =  692 bits (358), Expect = 0.0
 Identities = 388/398 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgagagaaactgaattttgcctggcagctacattggtcaatttaggtacattcatcagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgagagaaactgaattttgcctggcagctacattggtcaatttaggtacattcatcagt 260

                                                                       
Query: 61  ttaagtaagtagttaaattaatgagggacacacacacttgagtgtataatcataattgca 120
           ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ttaagtaagtagttacattaatgaggggcacacacacttgagtgtataatcataattgca 320

                                                                       
Query: 121 tatagttcagctcacacagattgttggacagaggtgtcggagtgtgttacaatgtggatt 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatagttcggctcacacagattgttggacagaggtgtcggagtgtgttacaatgtggatt 380

                                                                       
Query: 181 tgtcacacatggcatagtatggcctgaacatctgcaagggaccctgagatgctgacacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcacacatggcatagtatggcctgaacatctgcaagggaccctgagatgctgacacaa 440

                                                                       
Query: 241 agtgttgaacacaagagccctgcctcagggtccctctcatccctgtgcaagaacgtagaa 300
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 agtgttgaacacaagagccctgcctcagggtctctctcatccctgtgcaagaacgtagaa 500

                                                                       
Query: 301 gagagagttgtcgacctctcataagggaacaaattcaagtcatagcaagttattatgtac 360
           ||||||  |||  |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagagaactgttaacctctcagaagggaacaaattcaagtcatagcaagttattatgtac 560

                                                 
Query: 361 tttataaatgttgaaagagacgcaattcaagcttccca 398
           |||||||||||||||||||||||| |||||||||||||
Sbjct: 561 tttataaatgttgaaagagacgcacttcaagcttccca 598


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space:   306921
Effective search space used:   306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no347_f02.g1 MSMg01no347_f02.g1 CHROMAT_FILE:
MSMg01no347_f02.g1 PHD_FILE: MSMg01no347_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:15 2005
         (602 letters)



>mm_chr3_27466437_27467438
          Length = 1002

 Score =  884 bits (457), Expect = 0.0
 Identities = 487/497 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgcattttgagagaatgaacttgacattacctgaactattctgaacatggactagagt 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 497 actgcattttgagagaatgaacttgacattacctgaaatattctgaacatggactagagt 438

                                                                       
Query: 61  ccgttcaacagtttccacctttaaacgcgaattgtctgcatggccatgtttcccaagaga 120
           ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 437 ccgttcaacagttcccacctttaaactcgaattgtctgcatggccatgtttcccaagaga 378

                                                                       
Query: 121 atcctgatgcagtgttcttggccatcaacaacaacataaatatttacaatcttattaact 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atcctgatgctgtgttcttggccatcaacaacaacataaatatttacaatcttattaact 318

                                                                       
Query: 181 gatccaggacatgcaaggccaagtaaagtccctgccacacaaacatgaaagacgtccata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gatccaggacatgcaaggccaagtaaagtccctgccacacaaacatgaaagacgtccata 258

                                                                       
Query: 241 tccccagaatacaatagtagtcaagtgtggtgacaaaggctgtgggttgactgcaggtgg 300
           ||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 257 tccccagaatatagtagtagtcaagtgtggtgacaaaggctgtaggttgactgcaggtgg 198

                                                                       
Query: 301 agctcattagctagctgggctagccagttgaaggccatcaggttcaatgataccctttgt 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 197 agctcattagctagctgggctagccagttgaagaccatcaggttcaatgataccctttgt 138

                                                                       
Query: 361 cagaaaactaggcagaaagctatcaagaaagacacttagaattgatttactggcctctgc 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 137 cagaaaactaggcagaaagctatcaagaaagacacttggaattgatttactggcccctgc 78

                                                                       
Query: 421 acgcacgcacatgcttgtatacagaatatttatacatgaatgtatttatacagttctaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  acgcacgcacatgcttgtatacagaatatttatacatgaatgtatttatacagttctaca 18

                            
Query: 481 gacacacatatgctcat 497
           |||||||||||||||||
Sbjct: 17  gacacacatatgctcat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space:   587264
Effective search space used:   587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)