Query= MSMg01no349_b02.b1 MSMg01no349_b02.b1 CHROMAT_FILE:
MSMg01no349_b02.b1 PHD_FILE: MSMg01no349_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:34 2005
(472 letters)
>mm_chr3_68659049_68659920
Length = 872
Score = 890 bits (460), Expect = 0.0
Identities = 466/468 (99%), Gaps = 1/468 (0%)
Strand = Plus / Plus
Query: 5 gaattccagatgaggtgaggttgtaagaggatattgtaagaggatacatacaatggatct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagatgaggtgaggttgtaagaggatattgtaagaggatacatacaatggatct 264
Query: 65 tgtggcactcacccatgattccagcattgggaggctgggcaggaatattgtaagttcaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtggcactcacccatgattccagcattgggaggctgggcaggaatattgtaagttcaag 324
Query: 125 gccagcctaagttaccaagtaagaacttgcctcaaaacaaaacaacaaccatagaaaatg 184
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 gccagcctaagttaccaagtaagaacctgcctcaaaacaaaacaacaaccatagaaaatg 384
Query: 185 gaacatatcaaagatagccataattcttatcataggagaaggccatagcagagtcaagag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaacatatcaaagatagccataattcttatcataggagaaggccatagcagagtcaagag 444
Query: 245 gcaaagagatatttatattgccatagttctgggaaaaggagaattacctactcaatgtta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcaaagagatatttatattgccatagttctgggaaaaggagaattacctactcaatgtta 504
Query: 305 tggtctgtgaacactaacatctgatatctatttatctattctatttcccttatttctttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggtctgtgaacactaacatctgatatctatttatctattctatttcccttatttctttt 564
Query: 365 ttttttatttaattgcacgatcttactccatagcccaggataacctgcagctcagcttac 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttttt-tttaattgcacgatcttactccatagcccaggataacctgcagctcagcttac 623
Query: 425 tgtctagcccagactggcctggaatccactactatcttcctgcttggt 472
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtctagcccagactggcctggaatccactactatcttcctgcttggt 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_b02.g1 MSMg01no349_b02.g1 CHROMAT_FILE:
MSMg01no349_b02.g1 PHD_FILE: MSMg01no349_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:35 2005
(426 letters)
>mm_chr3_68808977_68809802
Length = 826
Score = 774 bits (400), Expect = 0.0
Identities = 417/426 (97%), Gaps = 6/426 (1%)
Strand = Plus / Minus
Query: 1 ctcaggccacccccgcccctgtggaaccatctcttaagagaaggacgtctgctgacaagt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 771 ctcaggccacccccgcccctgtggaaccatctcataagagaaggacgtctgctgacaagt 712
Query: 61 ctcctcccgtcggggctggggagtgaatgtgctcggaatcggggagggagggagagaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ctcctcccgtcggggctggggagtgaatgtgctcggaatcggggagggagggagagaggt 652
Query: 121 acagagtgggagagagagagagagagagagacaagttcgtccagcttcggggctgcgtgg 180
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acagagtgg------gagagagagagagagacaagttcgtccagcttcggggctgcgtgg 598
Query: 181 ctactctccagagcagcagctcctgcctgcccgggcgacttgtcaaccccctcccttctc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctactctccagagcagcagcgcctgcctgcccgggcgacttgtcaaccccctcccttctc 538
Query: 241 cccgccatttaggtcctgacgcccggacggccctcggagaagtccaggtctcttttcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cccgccatttaggtcctgacgcccggacggccctcggagaagtccaggtctcttttcctc 478
Query: 301 atcgccccagcggagaggatggccgaagccggagtcacccgccacacactgctgaactgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 atcgccccagcggagaggatggccgaagccggagtcacccgccacacactgctgaactgg 418
Query: 361 actctggcagcgtctgctcgggttgggtcactttccgggatagtagggggtctaaccctc 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 actctggcagcgtctgcttgggttgggtcactttccgggatagtagggggtctaaccctc 358
Query: 421 ccgggt 426
||||||
Sbjct: 357 ccgggt 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
