Query= MSMg01no355_c08.b1 MSMg01no355_c08.b1 CHROMAT_FILE:
MSMg01no355_c08.b1 PHD_FILE: MSMg01no355_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:31 2005
(602 letters)
>mm_chr3_64272187_64273188
Length = 1002
Score = 911 bits (471), Expect = 0.0
Identities = 477/479 (99%)
Strand = Plus / Minus
Query: 7 gaattctcactggataatggccatacccagtcatttacacatctatagcagtttcttgcc 66
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gaattctcactggagaatggccatacccagtcatttacacatctatagcagtttcttgcc 420
Query: 67 acatggtggcattagaagtttaacacagaccacgtttcctagagagctgacagtaaatat 126
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 419 acatggtggcattagaagtttaacacagaccacgtttcctagagagctgaaagtaaatat 360
Query: 127 caaagaacattattgatccctatcatcttccctttataaatataacctacttgggagaaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 caaagaacattattgatccctatcatcttccctttataaatataacctacttgggagaaa 300
Query: 187 ttatatagttccttacaagtggagttttaggaccaattataattactataatgaatgtaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttatatagttccttacaagtggagttttaggaccaattataattactataatgaatgtaa 240
Query: 247 tgagaaaattgactggtttttttaaaaagtgtattttactaaatactttcttcatttaca 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgagaaaattgactggtttttttaaaaagtgtattttactaaatactttcttcatttaca 180
Query: 307 tttcaaatgctatcccgaaagtcccctaaaccctcccccagccctgcaccccaaccaacc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tttcaaatgctatcccgaaagtcccctaaaccctcccccagccctgcaccccaaccaacc 120
Query: 367 cacacctgctacctgatgctggcattcccttgtactggggcatataatcttcaaaaagac 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cacacctgctacctgatgctggcattcccttgtactggggcatataatcttcaaaaagac 60
Query: 427 caagggtctttcctcccaaatgatggctgactaggccatcttctgctacatatgcagct 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 caagggtctttcctcccaaatgatggctgactaggccatcttctgctacatatgcagct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_c08.g1 MSMg01no355_c08.g1 CHROMAT_FILE:
MSMg01no355_c08.g1 PHD_FILE: MSMg01no355_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:31 2005
(426 letters)
>mm_chr3_63869651_63870476
Length = 826
Score = 613 bits (317), Expect = e-180
Identities = 399/437 (91%), Gaps = 20/437 (4%)
Strand = Plus / Plus
Query: 1 tttggattatcagttgtggtgaagaattattctttggagtgagaaagaatgatcatttct 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tttggactatcagttgtggtgaagaattattctttggagtgagaaagaatgatcatttct 258
Query: 61 tttaaacccagcagtggattggtt-cttctaagcctgtggccatcaggccaaatacattc 119
||| ||||||||||| |||||||| | ||||||||||| |||||||| |||||
Sbjct: 259 tttgaacccagcagtagattggttgc-tctaagcctgt--------ggccaaatgcattc 309
Query: 120 aaaattcctatcagaaatgttaatagtaaagtgtggcaaatatcataatcaccaggctac 179
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 310 aaaattcctatcagaaatgttaatagtaaaatgtggcaaatatcataatcaccaggctat 369
Query: 180 acccttaaacagaatactggactcaatctctagcattgcagaatcagtaggtgtaggtag 239
||||||||| ||||||||||||||| | ||||| ||||||||||||| |||| |||||||
Sbjct: 370 acccttaaatagaatactggactcagtttctagtattgcagaatcaggaggtataggtag 429
Query: 240 aggtctggatctttgcctttctcacaggttctaggatgatagaaagctacaacctcaggg 299
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 430 aggtctggatctttgcttttctcacacgttctaggatgatagaaagctacaacctcaggg 489
Query: 300 ccacattttcaggaa----------cattaattatttttctgtacattggttatgaggag 349
|||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 490 tcacattttcaggaatattagtgaacattaattacttttctgtacattggttatgaggag 549
Query: 350 gggccttgtggtcctaagatcacaaagcagagtttggggaggtagttctgcttgtttctc 409
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 550 tggccttgtggtcctaagatcacaaagcagagtttggggaggtagtcctgcttgtttctc 609
Query: 410 cagttgaattctttctg 426
|||||||||||||||||
Sbjct: 610 cagttgaattctttctg 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
