NTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATGATATTCGTAGGCAAATGGATGCATCTGGAGGATATCATCC
TGAGTGAGGTAACCCAATCACAAAAGAACACACATGATACGCACTCACTG
ATAAGTGGATATTAGCCTAGAAACTTAGAATATCCAAGATACAATTTCCA
AAACACGTGAAACTCAAGAAGAAGAAAGACCAAAGTGTAGATACTTTGCT
CCTTCTTAGAATAGGGAACAAAATACCCATGGGATGAGTTACAGAGACAA
AGTTCGGTGCTGAGAAGGAAGGAAAGATCATCCAGAGACTGCCCCACCCG
GGGATCTATCCCATATACAACCACCAAACCCAGACACTATTGCATACACC
AGCAAGATTTTGCTGACAGGACACTGGCATAGCTCTCTCTTGTGAGGCTA
TGCCAATGCCTGGCAAATACAGAACTGGATGCTCACAGTCAGCTATTGGA
TGGAACACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCT
AAAGGGGTCTGCAACCCTATAGGAGAAACAACGATATGAACTAACTAGTA
CCCCCAGAGCTCCTGTCTCTAGCTGCATATGCAGCAGAAGATGGCCCAGT
TGGTAATCCGTGCGAGGAGAGGCCCTTGGATTGCGAAGATCTTATGCCCC
CTAACAGGGGAATGTCCGGGCCCACCAAGGGGTAATCCTTGCTTTGTGGA
TCTGCCCG

NCCGAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCATCCCTCCTCCTTACCCC
AACAACACATAATAGAAGCAGTCACAAGCAGGGAAGTAAGATGGGCAGAA
GTAAGCCACTCATATCCCATGTAACTTCAAGCTCACCCCCAATACACACA
CACACACACACACACACACACACACACACACACACACACACACACACTAC
TTTGTCTATAAAAACTTCATTGAACTCGTCATAATGCCAAGAGACCTTCG
GATGACATGCATGTCTGTGCTGACTCTATCAGATTGGCAGCCTCTATGCA
GTTTCTGGACTTTCTGTTCAAGCGAGAAAGGAAAATGCAAACGAGTGCCC
TGAATGTGGTTAAAACTGGAAGCCAAGGGTGGGGAAAGGGAGCAAAGGTT
AGGGGAAAATAATGCTCAGTAGCAACCAGCAAAACAAATGTGTCCAGAGC
AACAGGAAAGCCAGGCAAACAGGCATCAGCCTGGGCATGGCTCATCTTTT
AGAAACAGTGTCCCTTGCTGTCTAATGCCAGGGCATGGGCGAGGAGTAGA
TACAGGCACCAAAAAGCCGCTCCTCGCAGACACTCACGTCCAAGGGTGGA
TTTATTTTTCCTATCTCCCAAAAATGGAAATTTGAGATCACAGAGAAGAG
CCGCCAATATTGTCTAATTATAAACCCGAGGCACTAAAGCCTAAAATTTT
TTTTGGTGTTG

Query= MSMg01no355_f16.g1 MSMg01no355_f16.g1 CHROMAT_FILE:
MSMg01no355_f16.g1 PHD_FILE: MSMg01no355_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:47 2005
         (474 letters)



>mm_chr3_58010606_58011479
          Length = 874

 Score =  756 bits (391), Expect = 0.0
 Identities = 447/485 (92%), Gaps = 31/485 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttcatccctcctccttaccccaacaacacata-----------atagaagcagtcaca 49
           ||||||||||||||||||||||||||||||||||           |||||||||||||||
Sbjct: 210 ttttcatccctcctccttaccccaacaacacataccaagtcctcaatagaagcagtcaca 269

                                                                       
Query: 50  agcagggaagtaagatgggcagaagtaagccactcatatcccatgtaacttcaagctcac 109
           |||||||||||||||||| ||||| ||||||| |||||||||||||   |||||||||||
Sbjct: 270 agcagggaagtaagatggacagaactaagccattcatatcccatgtggtttcaagctcac 329

                                                                       
Query: 110 ccccaatacacacacacacacacacacacacacacacacacacacacacacacacacaca 169
           ||||||                    ||||||||||||||||||||||||||||||||||
Sbjct: 330 ccccaa--------------------cacacacacacacacacacacacacacacacaca 369

                                                                       
Query: 170 ctactttgtctataaaaacttcattgaactcgtcataatgccaagagaccttcggatgac 229
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 370 ctactttgtctataaaaacttcattgaactcttcataatgccaagagaccttcggatgac 429

                                                                       
Query: 230 atgcatgtctgtgctgactctatcagattggcagcctctatgcagtttctggactttctg 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atgcatgtctgtgctgactctatcagattggcagcctctatgcagtttctggactttctg 489

                                                                       
Query: 290 ttcaagcgagaaaggaaaatgcaaacgagtgccctgaatgtggttaaaactggaagccaa 349
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttcaagcgagaaaggaaaatgcaaacgagtgccctgaatgtggttaaaactggaagccaa 549

                                                                       
Query: 350 gggtggggaaagggagcaaaggttaggggaaaataatgctcagtagcaaccagcaaaaca 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gggtggggaaagggagcaaaggttaggggaaaataatgctcagtagcaaccagcaaaaca 609

                                                                       
Query: 410 aatgtgtccagagcaacaggaaagccaggcaaacaggcatcagcctgggcatggctcatc 469
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aatgtgtccagagcaacaggaaagccaggcaaacaggcatcagcctgggcatggctcatc 669

                
Query: 470 tttta 474
           |||||
Sbjct: 670 tttta 674


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space:   400896
Effective search space used:   400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)