Query= MSMg01no356_h10.b1 MSMg01no356_h10.b1 CHROMAT_FILE:
MSMg01no356_h10.b1 PHD_FILE: MSMg01no356_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:11 2005
(431 letters)
>mm_chr3_122961633_122962467
Length = 835
Score = 748 bits (387), Expect = 0.0
Identities = 414/429 (96%), Gaps = 11/429 (2%)
Strand = Plus / Minus
Query: 7 atgtctgtgtttaagactctattctctctgggtgcaatttttggnttttttttttttttt 66
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 679 atgtctgtgtttaagactctattctctctgggtgcaatttttgg-------ttttttttt 627
Query: 67 tttagatgttagagacaatggtgatacttacggattttaacattttagatgatgatattc 126
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 626 tttagatgttagagacagtggtgatacttacggattttaacattttagatgatgatgttc 567
Query: 127 aggatagtgttttagtggttgtgatgacctctgggtttcagtgtctcagtttgcctaaaa 186
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agggtagtgttttagtggttgtgatgacctctgggtttcagtgtctcagtttgcctaaaa 507
Query: 187 taatccccatgctcattctccagatataacaactaggttgtctggtcataaaggctgctg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 taatccccatgctcattctccagatataacaactaggttgtctggtcataaaggctgctg 447
Query: 247 gggccagtttgatgggtctgcccattgttctaatttccactacagactcacatagcacat 306
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 446 gggccagtttgatgggtctgcccattgttcaaatttccactacagactcacatagcacat 387
Query: 307 aatttctgttagttaatatttgcacggcagaactctcaccttagcctaacctttccctgt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aatttctgttagttaatatttgcacggcagaactctcaccttagcctaacctttccctgt 327
Query: 367 caatctctttggtattccagac----aattatgccttggcctgaggttctggttctcaat 422
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 326 caatctctttggtattccagacaattaattatgccttggcctgaggttctggttctcaat 267
Query: 423 atgtagcaa 431
|||||||||
Sbjct: 266 atgtagcaa 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 835
Length adjustment: 9
Effective length of query: 422
Effective length of database: 826
Effective search space: 348572
Effective search space used: 348572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_h10.g1 MSMg01no356_h10.g1 CHROMAT_FILE:
MSMg01no356_h10.g1 PHD_FILE: MSMg01no356_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:12 2005
(409 letters)
>mm_chr3_122812057_122812869
Length = 813
Score = 748 bits (387), Expect = 0.0
Identities = 405/413 (98%), Gaps = 4/413 (0%)
Strand = Plus / Plus
Query: 1 cctcagtggataaagcatgcagtggatccctctgggtatagatcttcaggtactcaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcagtggataaagcatgcagtggatccctctgggtatagatcttcaggtactcaacac 260
Query: 61 aaggcaccctcagggattcattatcactgttgttgacaacagaaatggacttcgtgagtt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggcaccctcggggattcattatcactgttgttgacaacagaaatggacttcgtgagtt 320
Query: 121 aacaaaggtgaaaggaagagggaaggagcaagcaaaaacaaccaacagagaataaaaagg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 aacaaaggtgaaaggaagagggaaggagcaagcaaaaccaaccaacagagaataaaaagg 380
Query: 181 aagg----aaaaaaaagaaactgttttttctaaactccccatccagccaaccaacgaccc 236
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagaaaaaaaaaaaagaaactgttttttctaaactccccatccagccaaccaacgaccc 440
Query: 237 caccaacctttgcctaaagtaaagccaggactcagatttaaccgtggacggagcagcagt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caccaacctttgcctaaagtaaagccaggactcagatttaaccgtggacggagcagcagt 500
Query: 297 tggagccagagttctaacctctttctgccccagtgccatccctaccgtaactccacctga 356
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggagccagaattctaacctctttctgccccagtgccatccctaccgtaactccacctga 560
Query: 357 ggggtggcccgtgtagctccttggaggaggaagtcctatctgtacctcaggga 409
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggggtggcccgtgtagctccttggaggaggaagtcctatctgtacctcaggga 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 813
Length adjustment: 9
Effective length of query: 400
Effective length of database: 804
Effective search space: 321600
Effective search space used: 321600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
