TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGTTGATCCTAAAACACACTATAAACACAGTTGGCTTCAATGTCTGG
AAGCTAAGGGATGGATAATTTATCTGAGATATCTCTATGATACTTTCCAG
GGAATTAAAATTAATTTCTGTGGTCATATGTATAGATTAACAAAAATGAC
AGCAGGGAATGCCAATTAGTAAATAAAAATTATTTTAAGACTACTGGAAT
CAGTATCATAGCTCTTTATGGAAATGAATCCTTCATGATAATGATCCCTA
CTAGACTAAAATCAGGCACAAGCAACACAAGCCCTCCAGATGCTTGTCTT
GGTTATAGGCAGTATGGATGTTTTCACGGGGTTTCAGCACAGGATCAAAA
CTTCTAATAAATGTTTTATTTCCAAAATGCATGTCAAATATTGTGACATA
TATGCCATTGACTATGTCTAATAAAAGCGCTATAGCACAAAGACATTTTT
GGCAGCATATTCATCAGTTACATACACAATTGAGGCTTAACATACAAAGT
AATTTGGTAAATTACTCTGCCTTACTATAGTCTAGTTCTGGAACTCTCAT
CTGATAAGTATCATATAAACTAATCTTATATGGATTAAAACATGAATTTA
TTATNAAGTTCATTCAATTTAGTGTAGAGCCTAAGAGTACCAGAAACTCA
TCCTCCCAGGCTTCTCTCCTAAAAAATGGGGGTTAAAGGTTTCACCCTGC
CTTC

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACATAAACATAATAAAAG
CAATATATACAAACCAGCAGCCAATATAGAATTAAAAGGAGAAATACTTG
AAGCAATCCCACTAAAATCGTGGATAAGATAAGGATGCCAATTCGGCCCA
TATTTATTCAATATAGTACTCAAAGTGCTAGCTGGAACAATAAGACAACC
AAAAAAGAACAAAGGGATAAAAATTGGCAAAGAAGAAATAAAGATATCAC
TATTTGCAGATGATTTGATAGTATACATAAGTGATCCCAAAAATTCTACC
AGAGAACTTTTCCAACTGGTAAACAACTTCAGGAAAGAGACCGGATATAA
AATTAGCTCAAATAAATAAGTGGCCTTCATATATACAAATGATAAACAGG
CTAGAAAGAAATTAGGGAAACAATCTCCTTCACTACAGCCACAGATAATA
TAAAATATATTAGGCTAACCCTAACCAAATAAGTGAATGGTCGGTATGAC
AATAACTTCAAGTCTCTCAAGAAAAGAATCGAAGATCTCAGGAAAAGGCG
AGATCTCNAATGCTCATGGATTGGCAGAATAATACAGAAAAAATGCCTTC
CTACCAAGGGTTCTTACCGATTCTATTCATCCCCCTAAAAACCCCACCCC
ATTCCTTCAAAATTTGAAAAAAAAATTGCGCAATTTTTTTGGCCAGGGGA
AAAAACCCCAATTTC

Query= MSMg01no357_c10.b1 MSMg01no357_c10.b1 CHROMAT_FILE:
MSMg01no357_c10.b1 PHD_FILE: MSMg01no357_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:04 2005
         (601 letters)



>mm_chr3_12497915_12498914
          Length = 1000

 Score = 1094 bits (566), Expect = 0.0
 Identities = 590/598 (98%), Gaps = 1/598 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagttgatcctaaaacacactataaacacagttggcttcaatgtctggaagcta 63
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 204 ggaattcagttgagcctaaaacacactataaacacagttggcttcaatatctggaagcta 263

                                                                       
Query: 64  agggatggataatttatctgagatatctctatgatactttccagggaattaaaattaatt 123
            |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 264 -gggatggataatttatctgagatatctctatgatcctttccagggaattaaaattaatt 322

                                                                       
Query: 124 tctgtggtcatatgtatagattaacaaaaatgacagcagggaatgccaattagtaaataa 183
           ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 323 tctgtggtcatttgtatagattaacaaatatgacagcagggaatgccaattagtaaataa 382

                                                                       
Query: 184 aaattattttaagactactggaatcagtatcatagctctttatggaaatgaatccttcat 243
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaatcattttaagactactggaatcagtatcatagctctttatggaaatgaatccttcat 442

                                                                       
Query: 244 gataatgatccctactagactaaaatcaggcacaagcaacacaagccctccagatgcttg 303
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 443 gataatgatccctactagactaaaatcaggctcaagcaacacaagccctccagatgcttg 502

                                                                       
Query: 304 tcttggttataggcagtatggatgttttcacggggtttcagcacaggatcaaaacttcta 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcttggttataggcagtatggatgttttcacggggtttcagcacaggatcaaaacttcta 562

                                                                       
Query: 364 ataaatgttttatttccaaaatgcatgtcaaatattgtgacatatatgccattgactatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ataaatgttttatttccaaaatgcatgtcaaatattgtgacatatatgccattgactatg 622

                                                                       
Query: 424 tctaataaaagcgctatagcacaaagacatttttggcagcatattcatcagttacataca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctaataaaagcgctatagcacaaagacatttttggcagcatattcatcagttacataca 682

                                                                       
Query: 484 caattgaggcttaacatacaaagtaatttggtaaattactctgccttactatagtctagt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 caattgaggcttaacatacaaagtaatttggtaaattactctgccttactatagtctagt 742

                                                                     
Query: 544 tctggaactctcatctgataagtatcatataaactaatcttatatggattaaaacatg 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tctggaactctcatctgataagtatcatataaactaatcttatatggattaaaacatg 800


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1000
Length adjustment: 10
Effective length of query: 591
Effective length of database: 990
Effective search space:   585090
Effective search space used:   585090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)