XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGCTCATCTCTGG
CCAGGGAACTACTGGCCTTTAGTAGTTGGTGTCAGAGGGAGTTGGTTTTT
CCTGAAGAGTGTGGCCACTTGGGGATGACCCATACTCAGGCAGATGGCTC
CACCCTCATGTATATACAGGAAGCACTGACTGGATTATTTCTTTAAAAAA
AAAAAGAGGAAGATGAGGAGATAAAGTTGAGGAAGGGTGTGTTGGTGTTG
GGATAGAGTTCCAAAGGAAATTGGAGGGGTCAAATGGAGGCAGGTATGAA
AGTACACTGTATAACTAAATTAAATTTTCAAATATGAATAATTAAAACTA
ATAAGACATATTTAAAGTCTTGCATAATTAAAGCATTATATTTCTATAAA
TATACTATATTCTCAAAGCTGACTGAGGTGTTTCAGGCCCTGTAGCTTAA
CGATGTGCAGTGCAAAATGCCATGTGTTGCGTGCTAAGACTCCAGACTAT
ATAGTAAAATTCCATGATGCCACACAAGCAATCAAAGCTTAAAGCACCTT
AGATTCATAACACATTTGAGTAACTTTTGGACATGCCCATTCAGTTATGA
GACCTAATATGGGGTCATGACCCAGAGTTTAAAAGGCTATGACCCAGAGA
ATTGACTTCCAGACAGATTTCTGGCTTCAGAAACTGAGCTGGCAAGAGAT
CAGAATGACGGAATATTAAATCATTAAATAGTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXACGCTTGTTGTCTTAGTTAGGGCTTCCATGGCTGTGAAG
AGACACCATGACCAAGGCAGCTCTTATAAAGGACAGCGTTTAATCGGGGC
TGGCTTACAGGCTCTGAGGATCAGTCCATTATCTTCATGGCTGGAAGCAT
GGCAGCCTGCAGGCAGACGTGGTGCTGGAGGAGTGGAGAGTTAGGTAGGC
AGGAAGCAGCTTCTTTTCCACCCTGGGCAGAGCTTAAGCACAGGACCTCA
AAGCCTAACCCACAGTGACACACTTCCTCCCAGGCCACACCTATTCCAAC
AAGGACACGCCTCCGAATAGTGTCATTTCCAAGCACTCAAACACATGAGT
CTATAGGGCCAAAGCTATTCAAACCACCACAGTGCTGATCCACTTGGAGC
TGATTTTTTTTTATGCAATTATAAAGAATTTTTATACTCCACGGCATTTT
ATTGCCTTACGCTTTACATTTAATTCCACGATCCATTTTGAGTTGGTTTC
CGTAGAAAGTGCCAGAAGTGTCAATACAATTTGCTGAACTTGAATCCAGT
AATTAAATAAAAACTTTTAGGTTAAAAATGTAAGTGCCACAGATGCAGTA
GTTAAACTTTGGTGGGAGGAAAGTTTTCCCTCCTGGGGAGGAAATGGATT
TGAGAAGCAACCCTCCGCTTTAATAC

Query= MSMg01no358_g03.b1 MSMg01no358_g03.b1 CHROMAT_FILE:
MSMg01no358_g03.b1 PHD_FILE: MSMg01no358_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:38 2005
         (583 letters)



>mm_chr3_69207450_69208436
          Length = 987

 Score =  926 bits (479), Expect = 0.0
 Identities = 525/541 (97%), Gaps = 6/541 (1%)
 Strand = Plus / Minus

                                                                       
Query: 28  ctggcctttagtagttggtgtc--agagggagttggtttttcctgaagagtgtggccact 85
           |||||||| |||||||||||||  |||||||| |||||||||||||| ||||||||||||
Sbjct: 540 ctggccttcagtagttggtgtcagagagggagctggtttttcctgaatagtgtggccact 481

                                                                       
Query: 86  tggggatgacccatactcaggcagatggctcca-ccctcatgtatatacaggaagcactg 144
           ||| ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 480 tggagatgacccatactcaggcagatggctccatccc-catgtgtatacaggaagcactg 422

                                                                       
Query: 145 actggattatttcttt-aaaaaaaaaaagaggaagatgaggagataaagttgaggaaggg 203
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actggattatttctttaaaaaaaaaaaagaggaagatgaggagataaagttgaggaaggg 362

                                                                       
Query: 204 tgtgttggtgttgggatagagttccaaaggaaattggaggggtcaaatggaggcaggtat 263
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtgttggtgttgggaaagagttccaaaggaaattggaggggtcaaatggaggcaggtat 302

                                                                       
Query: 264 gaaagtacactgtataactaaattaaattttcaaatatgaataattaaaact-aataaga 322
           ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 301 gaaagtacactgtataactaaattaaaatttcaaatatgaataattaaaactaaataaga 242

                                                                       
Query: 323 catatttaaagtcttgcataattaaagcattatatttctataaatatactatattctcaa 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catatttaaagtcttgcataattaaagcattatatttctataaatatactatattctcaa 182

                                                                       
Query: 383 agctgactgaggtgtttcaggccctgtagcttaacgatgtgcagtgcaaaatgccatgtg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctgactgaggtgtttcaggccctgtagcttaacgatgtgcagtgcaaaatgccatgtg 122

                                                                       
Query: 443 ttgcgtgctaagactccagactatatagtaaaattccatgatgccacacaagcaatcaaa 502
           |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 ttgtatgctaagactccagactatatagtaaaattccattatgccacacaagcaatcaaa 62

                                                                       
Query: 503 gcttaaagcaccttagattcataacacatttgagtaacttttggacatgcccattcagtt 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcttaaagcaccttagattcataacacatttgagtaacttttggacatgcccattcagtt 2

            
Query: 563 a 563
           |
Sbjct: 1   a 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 987
Length adjustment: 10
Effective length of query: 573
Effective length of database: 977
Effective search space:   559821
Effective search space used:   559821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)