Query= MSMg01no363_a19.b1 MSMg01no363_a19.b1 CHROMAT_FILE:
MSMg01no363_a19.b1 PHD_FILE: MSMg01no363_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:38 2005
(510 letters)
>mm_chr3_150014967_150015877
Length = 911
Score = 965 bits (499), Expect = 0.0
Identities = 505/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Minus
Query: 5 gaattctattgcttgcacttacttctattttagatgaataattaaccagtataaaattat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaattctattgcttgcacttacttctattttagatgaataattaaccagtataaaattat 652
Query: 65 ttaaggagtaaactctgtcatgaggcagacccacctgggctgaatcacaaagtcacctgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ttaaggagtaaactctgtcatgaggcagacccacctgggctgaatcacaaagtcacctgg 592
Query: 125 ttttgaatttgcaaggctgcttgagctaaccccagggcatggagctgaagggcagccagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttttgaatttgcaaggctgcttgagctaaccccagggcatggagctgaagggcagccagc 532
Query: 185 actgggtaaggcaaactggagagggtaagctttcaaacaaaagaaaagcgctctgtgaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 actgggtaaggcaaactggagagggtaagctttcaaacaaaagaaaagcgctctgtgaac 472
Query: 245 agcacgtgccaatgtggcacacattttaaagaatgaaccctcgggcctggaaaaaaatta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agcacgtgccaatgtggcacacattttaaagaatgaaccctcgggcctggaaaaaaatta 412
Query: 305 atgagttctgcctctcctttctgtgaccttt-gctgggttttcatgggcatttgtttttc 363
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 411 atgagttctgcctctcctttctgtgacctttcgctgggttttcatgggcatttgtttttc 352
Query: 364 tttgttttaggctgagctgctctgtgaagtcacagtgggagcttgggtctgcagcagggc 423
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 351 tttgttttaggctgagctgctctgtgaagtcacagtgggagattgggtctgcagcagggc 292
Query: 424 tcctgtgacacagctttcgcaggctaccactgagttgttatctcttgagtaatccaaggc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcctgtgacacagctttcgcaggctaccactgagttgttatctcttgagtaatccaaggc 232
Query: 484 cctgaactaggcaaattcactgagaag 510
|||||||||||||||||||||||||||
Sbjct: 231 cctgaactaggcaaattcactgagaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_a19.g1 MSMg01no363_a19.g1 CHROMAT_FILE:
MSMg01no363_a19.g1 PHD_FILE: MSMg01no363_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:38 2005
(527 letters)
>mm_chr3_149859460_149860386
Length = 927
Score = 982 bits (508), Expect = 0.0
Identities = 522/527 (99%)
Strand = Plus / Plus
Query: 1 tatggtacctaatgtatttggggtccagtatttacttagtcattgtttttcttgggtgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tatggtacctaatgtatttggggtccagtatttacttagtcattgttttccttgggtgtc 260
Query: 61 tatatacacaatgtgaagggatgaacagaaacagtggtctcatcatttactctacacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatatacacaatgtgaagggatgaacagaaacagtggtctcatcatttactctacacttt 320
Query: 121 ccaaataagagaagctcaaattcaggaaagagtaaactgtcaagctactctttagttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaaataagagaagctcaaattcaggaaagagtaaactgtcaagctactctttagttcct 380
Query: 181 taatttaaaaatttagaaaatttatgatatatgaaattttccacattcaattttctgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatttaaaaatttagaaaatttatgatatatgaaattttccacattcaattttctgctg 440
Query: 241 tcaataatctactgaaatgaaacacattgttttaaaaatttctgtgtttcataggaattt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaataagctactgaaatgaaacacattgttttaaaaatttctgtgtttcataggaattt 500
Query: 301 cagaacctcatacatttttaggatatgtcctaatattaatcacagacatcatctaacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagaacctcatacatttttaggatatgtcctaatattaatcacagacatcatctaacaaa 560
Query: 361 ggacaaatgtattagttggtatagcatcaaaaccactgttaataatagagctctggtcca 420
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 ggacaaatgtattaggtggtatagcatcaaaaccactattaataatagagctctggtcca 620
Query: 421 cactattaaatatggggctacatcatgttaaaagcgtgtttatttgccttttatatacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactattaaatatggggctacatcatgttaaaagcgtgtttatttgccttttatatacac 680
Query: 481 acatatttatacnaaacacaaacaaaaaacttggggcaatttataaa 527
|||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 acatatttatacaaaacacaaacaaaaaacttggggcaatttataaa 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
