Query= MSMg01no363_c04.b1 MSMg01no363_c04.b1 CHROMAT_FILE:
MSMg01no363_c04.b1 PHD_FILE: MSMg01no363_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:45 2005
(417 letters)
>mm_chr3_75763536_75764352
Length = 817
Score = 694 bits (359), Expect = 0.0
Identities = 395/407 (97%), Gaps = 4/407 (0%)
Strand = Plus / Plus
Query: 10 gaattcacaattcctaccctaaacctttgatttgatagcaa-cagtttcattcctgtttc 68
||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||
Sbjct: 210 gaattcacaattcctactttaaacctttgatttgatagcaacca-tttcattcctgtttc 268
Query: 69 ttaacttcttctttgcctgaagca-tccatctgattctacagaatataataaaggtcata 127
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 269 ttaacttcttctttgcctgaagcagtc-atctgattctacagaatataataaaggtcata 327
Query: 128 aaacacaactcaatattttagtcataaaacttgaaagacaagaaaattattacctgacct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 328 aaacacaactcaatattttagtcataaaacttgaaagacaagaaaattattacctgaact 387
Query: 188 tactcattatttcaagttcaagaagggtgtgcagaagtacataaaatcactaatggcagt 247
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 388 tactcattatttcaagttcaagaagggtttgcagaagtacataaaatcactaatggcagt 447
Query: 248 gtctttataatactacattttcaaggagaccaatgtctctatattcttgactatacaagt 307
|||||||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 448 gtctttatgatattacattttcaaggagaccaatgcctctagattcttgactatacaagt 507
Query: 308 atagagcttttgagcagccaacataggaggcatccagagactacatattaaatttacata 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atagagcttttgagcagccaacataggaggcatccagagactacatattaaatttacata 567
Query: 368 gccatgcctttgggtagagtttataatatatgagctactttcactgg 414
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gccatgcctttgggtagagtttataatatatgagctactttcactgg 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_c04.g1 MSMg01no363_c04.g1 CHROMAT_FILE:
MSMg01no363_c04.g1 PHD_FILE: MSMg01no363_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:45 2005
(514 letters)
>mm_chr3_75926173_75927086
Length = 914
Score = 636 bits (329), Expect = 0.0
Identities = 335/337 (99%)
Strand = Plus / Minus
Query: 178 ggtgttttcggaggggaaaccaggaaaggggataacatttgaaatgtaaatatagaaaat 237
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 ggtgtttttggaggggaaaccaggaaaggggataacatttgaaatgtaaatatagaaaat 855
Query: 238 atctaataaaaaattctttaccaaactgttatcacatgaaatttgaaataatctaaactt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 atctaataaaaaattctttaccaaactgttatcacatgaaatttgaaataatctaaactt 795
Query: 298 gtgttcatagactttggctgtgtttgccttcagaataaactaatctcttctcatctttaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gtgttcatagactttggctgtgtttgccttcagaataaactaatctcttctcatctttaa 735
Query: 358 ggtctgagttgtgattcttggcaacacagggttgtctctataggcatagcatcagaatat 417
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggtctgagttgtgattcctggcaacacagggttgtctctataggcatagcatcagaatat 675
Query: 418 gttctgtacctttaacatgtgagacccattgaaagcccacggagggtaccctcaaaggga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gttctgtacctttaacatgtgagacccattgaaagcccacggagggtaccctcaaaggga 615
Query: 478 actggggagccaaggctctttcactgtctctccctgt 514
|||||||||||||||||||||||||||||||||||||
Sbjct: 614 actggggagccaaggctctttcactgtctctccctgt 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
