Query= MSMg01no365_b23.b1 MSMg01no365_b23.b1 CHROMAT_FILE:
MSMg01no365_b23.b1 PHD_FILE: MSMg01no365_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:32 2005
(462 letters)
>mm_chr3_4757059_4757920
Length = 862
Score = 878 bits (454), Expect = 0.0
Identities = 460/462 (99%)
Strand = Plus / Minus
Query: 1 atcacaaaatgtttgatgctaaggtagtcatatatatgatgctaattttaggactagttt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 662 atcacaaaatgtttgatgctaaggtagtcatatttatgatgctaattttaggactagttt 603
Query: 61 tcctgatgtaacaaatttatacatagctagagaaatgctctaatcctacaaaaatgccct 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 602 tcctgatgtaacaaatttatacatagctagagaaatgctctaatcctataaaaatgccct 543
Query: 121 ggctaattctcccagaatgaagccaaattactcatcctttcaatgaaaatgaaatcatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggctaattctcccagaatgaagccaaattactcatcctttcaatgaaaatgaaatcatag 483
Query: 181 catcatatgaaacactgctgaggtaagtccaaatgctaatgcaaaaatttcacttgaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 catcatatgaaacactgctgaggtaagtccaaatgctaatgcaaaaatttcacttgaaaa 423
Query: 241 aaaaatcactaaattacaatgttgcctacctttccttctcaaattaccatgatgattcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaaaatcactaaattacaatgttgcctacctttccttctcaaattaccatgatgattcaa 363
Query: 301 atatgtttggatgctttatacacagaactttagaagggaaaaagtattccaaccacaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atatgtttggatgctttatacacagaactttagaagggaaaaagtattccaaccacaatt 303
Query: 361 tattctttggcatgctcctctcaacagcttcgaaaagcagacagttcctctgcaaggcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tattctttggcatgctcctctcaacagcttcgaaaagcagacagttcctctgcaaggcaa 243
Query: 421 ctaagaagaccatatgtagtcagcagtgtttgctgatacaga 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctaagaagaccatatgtagtcagcagtgtttgctgatacaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_b23.g1 MSMg01no365_b23.g1 CHROMAT_FILE:
MSMg01no365_b23.g1 PHD_FILE: MSMg01no365_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:32 2005
(547 letters)
>mm_chr3_4582408_4583354
Length = 947
Score = 1004 bits (519), Expect = 0.0
Identities = 537/543 (98%)
Strand = Plus / Plus
Query: 5 acagatggtcgctatcaaatacaaacagttcccaggcttgtggccaagcactatcctaat 64
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 205 acagatggtcgctatcaaatacaaacagttcccaggcttgtggccaaggactatcctaat 264
Query: 65 tggtaatgaccacttgttcatggtcacctttgaagtggtgccagcattagcaggagttgt 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 265 tggtaatgaccacttgttcatggtcacctttgaagtggtgccaacattagcaggagttgt 324
Query: 125 ggtttccttggccttcacttgctggtactgaccagcagcgaaatgggaatcaatctctgt 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtttcctcggccttcacttgctggtactgaccagcagcgaaatgggaatcaatctctgt 384
Query: 185 caggactgtaattgagcacttccttaatttatgagacagttttcccattaacaacaaaat 244
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggactgtaattgagcacttccctaatttatgagacagttttcccattaacaacaaaat 444
Query: 245 cttgagaattaaataaaaacagaccttcacaagtgctgcagcttaggtgcatgtggcgta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttgagaattaaataaaaacagaccttcacaagtgctgcagcttaggtgcatgtggcgta 504
Query: 305 aacgttgataaatgtacgtgccttgtggaagcctgactttgaaaaattctgtgtcagagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacgttgataaatgtacgtgccttgtggaagcctgactttgaaaaattctgtgtcagagt 564
Query: 365 tttaggtcattttctgacaacaattaggaacattgaacggaatagctggcgattcttctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttaggtcattttctgacaacaattaggaacattgaacggaatagctggcgattcttctt 624
Query: 425 ggatatgacaggtgatgtaaagccatctttccagagaaaagtccttttatgagtatgaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggatatgacaggtgatgtaaagccatctttccagagaaaagtccttttatgagtatgaaa 684
Query: 485 tgcaggatgcaggcacacccttgggactgagaatctgtaggtacttccactaaaggtcag 544
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 685 tgcaggatgcaggcatacccttgggactgagaatctgtaggtacttccactgaaggtcag 744
Query: 545 ggt 547
|||
Sbjct: 745 ggt 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
