TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACAATTAACTGGAACTTCATAAAAATGTAAAAATCTTTCACATTTT
TACAGTAAATATCTATTTTCAAATGAATTGTAATTATTCTTTAATTTATG
AAATCTAAAGAAGTGTTCTAATGTGTCTTTTAAAGAGCCAATACAAAGGT
GAGATGTTATTTAAACAAATATTTAGAAATTCTCCATAGACCGCCTGCTA
GTGACTTCATGTAGTGACACCATTCAATAGTGCACCAGGCTTGAAAAGTG
CAGTGAAATCAATCTTCCACCGACCTTCCCATTTATGTGTCAGCACTGAG
AACTGACATTTAGAGCATTATCATTATATAGTAATAAAATGTGAGGTGAA
AAAGCTAAAACAGAACAATGTGCTGGAATATCTCTGAACTTTCCCTGCAG
TAGCTAAACTGCCATGCCTCTGTGAACATGGCTTGTATATCCATGGACTC
AGGAAAATATTTGCCACCGCTAAAATTCACAGACTTGGTCTTCACAATTC
TCCAAACAAAGTTAACTATTTGCACAACACTTCCATTGTGTCTGCCACTA
TAAGTATCACAGAATGATTTATAGCATACCGAGGCATAGGCTACATGCAG
GCACCCCCCCAATTTATGTAAAGGACTTACCCCTGGAAAACGGTATAAAA
AATCCCCCTGTTCGAAATTTCGGAAGGAAACTTGTCAAAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTCACCTGAGGAATACCAAATGTGTGAGAAACACCTGAAAAAAA
TGTTCAGCATTCTTAATCATCAAGGAAATGCAAATCAAAACAACCCTGAG
ATTCCATCTCACACCAGTCAGAATGGCTAAGATAAAAAATTCAGGTGACA
GCAGATGTTGGTAAGGACCTGGAGAAAGAGGAACACTCCTCCACTGTTGG
TGGGATTGCAAGCTTGAACAACCACTCTGGAAATCAGTCTGGCAGTTCCT
CAGAAAATTGGACATGGTACTACCGGAGGGTCCTGCAATACCTCTCCTGG
GCATATATCCAGAAGATGTTCCAACTAGTAAGAAAGAAACATGCTCCCCT
ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAG
ATGTCCCTCAACAGAGGAATGGATACAAAAAATGTGGTACATTTACACAA
TGGAGTACTACTCAGCTATTAAAAGAATGAATTTATGAAATTCCTAGGCA
AATGGTTGGACCTGGAGGGCATTATCCTGAGTGAGGTAACCCAATCACAA
AATAACTCAAATGATATGTACTCACTGGTAAGTGTATATTAACCCAGAAA
CTTATAAAAACCCAGATATATGGGACAATTTTGCAAACACCTGTAACCTC
CGATTTACGAAGACCCTGTTGTGGACCCTTTGCCCCTTTT

Query= MSMg01no365_f04.b1 MSMg01no365_f04.b1 CHROMAT_FILE:
MSMg01no365_f04.b1 PHD_FILE: MSMg01no365_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:47 2005
         (551 letters)



>mm_chr3_147275387_147276337
          Length = 951

 Score = 1050 bits (543), Expect = 0.0
 Identities = 546/547 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacaattaactggaacttcataaaaatgtaaaaatctttcacatttttacagtaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaattaactggaacttcataaaaatgtaaaaatctttcacatttttacagtaa 264

                                                                       
Query: 65  atatctattttcaaatgaattgtaattattctttaatttatgaaatctaaagaagtgttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atatctattttcaaatgaattgtaattattctttaatttatgaaatctaaagaagtgttc 324

                                                                       
Query: 125 taatgtgtcttttaaagagccaatacaaaggtgagatgttatttaaacaaatatttagaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatgtgtcttttaaagagccaatacaaaggtgagatgttatttaaacaaatatttagaa 384

                                                                       
Query: 185 attctccatagaccgcctgctagtgacttcatgtagtgacaccattcaatagtgcaccag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attctccatagaccgcctgctagtgacttcatgtagtgacaccattcaatagtgcaccag 444

                                                                       
Query: 245 gcttgaaaagtgcagtgaaatcaatcttccaccgaccttcccatttatgtgtcagcactg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcttgaaaagtgcagtgaaatcaatcttccaccgaccttcccatttatgtgtcagcactg 504

                                                                       
Query: 305 agaactgacatttagagcattatcattatatagtaataaaatgtgaggtgaaaaagctaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agaactgacatttagagcattatcattatatagtaataaaatgtgaggtgaaaaagctaa 564

                                                                       
Query: 365 aacagaacaatgtgctggaatatctctgaactttccctgcagtagctaaactgccatgcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aacagaacaatgtgctggaatatctctgaactttccctgcagtagctaaactgccatgcc 624

                                                                       
Query: 425 tctgtgaacatggcttgtatatccatggactcaggaaaatatttgccaccgctaaaattc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 625 tctgtgaacatggcttgtatatccatggactcaggaaaatatttgccactgctaaaattc 684

                                                                       
Query: 485 acagacttggtcttcacaattctccaaacaaagttaactatttgcacaacacttccattg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acagacttggtcttcacaattctccaaacaaagttaactatttgcacaacacttccattg 744

                  
Query: 545 tgtctgc 551
           |||||||
Sbjct: 745 tgtctgc 751


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space:   509081
Effective search space used:   509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)