XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACC
TAGCATGTAGACCAAGGAATAACATAGGTGATCTTAACTCTCCCTCCTCT
TCTCTAATTCCAATTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTAATTGGTTTTTCAAGACAG
GGTTTCTCTGTATATCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGG
CTTGCCTCAAACTCAGAAATCCACCTACCTTTGCCTCCCAAGTGCTGGGA
ATGAAGGTGTGTGCCATGACTGCCCAGCCAATTCTAATTTCTAAGGAAGC
TCTATACTGAGAGTTTTATCTGACACCAGTCAGTATGGCCAAGATCATTA
TAACAAATGACAGCCCATACTGAGGAGTACATAGAATAAGAGAAACAATC
ATCCATTGCTGATGAGACTGCAAACTTGTGCACCCATTAAGAAAACAGTG
TGGGAGTTCTTCAGGAAGCTGGGAATAAACCTAACTTGAAAGCCATAACT
AACTCTTGCGCATATAAACAATAGATGCCTAATTGTAATTGCAGAAACCT
TTTGATTCACTATGTTTGGGTGATGGTCCTTTTCACAAAGAAATAGAATT
TGGGATATATGCCCAGAAATGCTATTTGGAAGGAATGTTTATTACCGGGG
GGGTATTTT

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTCCCTTACTGTAGGACTGTAAACAGAA
GAGATTTAAAAAAGGTACCAGTAGCAAAAACCTACCAAATACTTTATCTT
ATATGGGAGAACTTTAAGCTGCAGGAGAGATAGAAAATGGCCACCTGTCT
GTGTTTCTATAGCTAAGGCTCAGGCTAAACAGGGAGCTGACTAAGAGACA
ATCTATAAGGCACTCACTTTACTAGGGAGTAGAAATTTCAACATTATCCT
GTCTCTAATACCCAAAGCTCCTTGTGCTACCCAGAGTATCATCCTGGCCA
GGAGAGAAGTTGATCTAGCTGGAAACTCAGGTGTGAGTATATTTGAGAAA
GACTGGTGTTCAAACAAAACAAAACAAAACAAAAAAAAAAACAAAAAAAA
AACAACACAGGGTGAACTTCAGGTTAGAAATCCACAAACATAGATGGCTA
AAAGCACTGCTGCAGAATAAAGGGTTAGAGACAGCAGTTTTCAACCTATG
GGATATGAGATAGTTACATTATGATTTGTAACAATAACAAAATGAGATCT
ATGGATTAGCAATGAAATTATTTTATGGGACAGGAATCTAACTGTATTAA
AGGGCTTAACATTAAGAAGGGCCGACCCGGGGGTAAAGGGTGAACTTCTT
TAGAGCCATGACAAGGGCCCTTCTTAAACTCCGAACGTGGGACAACCAAA
AAAAAGTGGGAAATTG

Query= MSMg01no365_p23.g1 MSMg01no365_p23.g1 CHROMAT_FILE:
MSMg01no365_p23.g1 PHD_FILE: MSMg01no365_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:41 2005
         (480 letters)



>mm_chr3_13094092_13094971
          Length = 880

 Score =  843 bits (436), Expect = 0.0
 Identities = 474/496 (95%), Gaps = 16/496 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcccttactgtaggactgtaaacagaagagatttaaaaaaggtaccagtagcaaaaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttcccttactgtaggactgtaaacagaagagatttaaaaaaggtaccagtagcaaaaacc 480

                                                                       
Query: 61  taccaaatactttatcttatatgggagaactttaagctgcaggagagatagaaaatggcc 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 479 taccaaatactttatcttatatgggagaactttaagctgcaggagagagagaaaatggcc 420

                                                                       
Query: 121 acctgtctgtgtttctatagctaaggctcaggctaaacagggagctgactaagagacaat 180
           ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 419 acctgtctgtgcttctatagctagggctcaggctaaacagggagctgactaagagacaat 360

                                                                       
Query: 181 ctataaggcactcactttactagggagtagaaatttcaacattatcctgtctctaatacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctataaggcactcactttactagggagtagaaatttcaacattatcctgtctctaatacc 300

                                                                       
Query: 241 caaagctccttgtgctacccagagtatcatcctggccaggagagaagttgatctagctgg 300
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 299 caaagctccttgtgctacccagagaatcatcctggccaggagagaagttgatctagctgg 240

                                                                       
Query: 301 aaactcaggtgtgagtatatttgagaaagactggtgttcaaacaaaa----caaaacaaa 356
           |||||||||||||||||||||||||||||||||||||||||| ||||    |||||||||
Sbjct: 239 aaactcaggtgtgagtatatttgagaaagactggtgttcaaaaaaaaaaaacaaaacaaa 180

                                                                       
Query: 357 acaaaaaaaaaaacaaaaaaaaaacaa------------cacagggtgaacttcaggtta 404
           | |||||||||||||||||||||||||            |||||||||||||||||||||
Sbjct: 179 aaaaaaaaaaaaacaaaaaaaaaacaaaaaaagaaacaacacagggtgaacttcaggtta 120

                                                                       
Query: 405 gaaatccacaaacatagatggctaaaagcactgctgcagaataaagggttagagacagca 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gaaatccacaaacatagatggctaaaagcactgctgcagaataaagggttagagacagca 60

                           
Query: 465 gttttcaacctatggg 480
           ||||||||||||||||
Sbjct: 59  gttttcaacctatggg 44


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)