NGGGCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACCAGAGCATACGGAGAATGGAGTAGGAAAGTCAAATAGAA
TAGAATAACTATGCACACCGAGGCCAACGAAAAGCAGTCATGTACAAATG
AAATCTATACAGCCATTGTCCAGGGCTAAAGTTAGGAGAAGTGGGAGCAA
CTTTTTTTTTTTTTACAAGGAGCTGCCTCAGGCTTCTGAGATGTCTCCAT
CCTGGCCTGTTTCAGGCAGCCCCTGTCATGGTATGCTGTCCCCAGCACAA
GATTACTGTGCAAAACATGTGAAAGTTTTGTTTTTTTATTATTAAATTAT
TAAATTGAAAATATTGACTCCCTTCCTGGTCCCCCCTCCAAGAGTTCTTC
ACCACATCTCCCCTCTTCTCTGCCTCTGAGAGGGTGCTTCTCACATACCC
ACCCACTCACTCCCCTCACCCCCCTCACCCCACCCACCTCACCCATGCAC
AGCACCCCTCTTCCTTGGGACATCAAATCTCTATAGGATTAGGTGCATCC
TCTCCTACTGAGGCCAGACAAGACAGGTACATATGTGCCAGGGACCATGG
ACCAGCCCGTGTATGCTCTTTGATTGGTGGCTTAGTTACTTGGAGCTCTG
AGGGGTTGATACTGCTGTTCTTCCTATGGGGTTGCAATCATTTTCAACTT
CTTCAATCCTTCCCCTAACTCTTCATAAAGAAGGGGCCACCCACN

NTTCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGGGATCCTGCCAGGTGT
GTCCACTGCTTTCTTCTGGCTGGAGTGCTCGCTTTCATTTTTTAAGTGTA
GTCATTCATAGCTATAGACATCTATCTTTGAGCTGCTTTTCTATAAAGGT
TCTAGGAGTTATTAAATTTCCTGTCTGATTCGTTGTGGATGCTCTGATCA
CTGAAGTGTTCATTGCTCAACTTTGTGTCTTTATGCTATTTTATGCTTTT
ATTCTATTGTTGTTTGGTATGATTTTTTGATACTTGATTAATGACCTAAG
GCAACCTAAACTGGTGGTTTATTTTTGAGAGTCAGGTGTGGATAAATGCC
TTCACTTGCTCAGTGCATCATTTTCTTTCCTTCATCCCTCCCACAGTCCC
CACTGAGGTGAGATCCTGTAAAGAGCATGCGTTTGGATTTTGTTTTTTAA
TCCAACCAATTAGTCTGCATTTTTTTTATTGGGGAGGTAAGGCCATTTGT
ACTTAGGATTGTAATTAACAGGTATTTGTTGATTTTTGTAATTTCCTTCT
TTGGTTTCCTCATTTGGTACAATACTGGTTCCTCTTTTCCTCCTATCCCT
TAGTCCATTGTAGGGGTTTTGGTTGGGTTATTGACTTGGTGCTTCTTAAA
TTCCCCCCTGAATTTCCTTGTTTGCTTGCTTCTTTTCTGAAG

Query= MSMg01no366_i02.g1 MSMg01no366_i02.g1 CHROMAT_FILE:
MSMg01no366_i02.g1 PHD_FILE: MSMg01no366_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:22 2005
         (527 letters)



>mm_chr3_10033013_10033939
          Length = 927

 Score =  996 bits (515), Expect = 0.0
 Identities = 524/527 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccgggatcctgccaggtgtgtccactgctttcttctggctggagtgctcgctttcatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccgggatcctgccaggtgtgtccactgctttcttctggctggagtgctcgctttcatt 260

                                                                       
Query: 61  ttttaagtgtagtcattcatagctatagacatctatctttgagctgcttttctataaagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaagtgtagtcattcatagctatagacatctatctttgagctgcttttctataaagg 320

                                                                       
Query: 121 ttctaggagttattaaatttcctgtctgattcgttgtggatgctctgatcactgaagtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctaggagttattaaatttcctgtctgattcgttgtggatgctctgatcactgaagtgt 380

                                                                       
Query: 181 tcattgctcaactttgtgtctttatgctattttatgcttttattctattgttgtttggta 240
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcactgctcaactttgtgtctttatgctattttatgcttttattctattgttgtttggta 440

                                                                       
Query: 241 tgattttttgatacttgattaatgacctaaggcaacctaaactggtggtttatttttgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgattttttgatacttgattaatgacctaaggcaacctaaactggtggtttatttttgag 500

                                                                       
Query: 301 agtcaggtgtggataaatgccttcacttgctcagtgcatcattttctttccttcatccct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtcaggtgtggataaatgccttcacttgctcagtgcatcattttctttccttcatccct 560

                                                                       
Query: 361 cccacagtccccactgaggtgagatcctgtaaagagcatgcgtttggattttgtttttta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccacagtccccactgaggtgagatcctgtaaagagcatgcgtttggattttgtttttta 620

                                                                       
Query: 421 atccaaccaattagtctgcattttttttattggggaggtaaggccatttgtacttaggat 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 atccaaccaattagtctgcattttttttattggtgaggtaaggccatttgtacttaggat 680

                                                          
Query: 481 tgtaattaacaggtatttgttgatttttgtaatttccttctttggtt 527
           ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 tgtaattaacaggcatttgttgatttttgtaatttccttctttggtt 727


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space:   474089
Effective search space used:   474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)