Query= MSMg01no366_m08.b1 MSMg01no366_m08.b1 CHROMAT_FILE:
MSMg01no366_m08.b1 PHD_FILE: MSMg01no366_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:42 2005
(248 letters)
>mm_chr3_137425952_137426598
Length = 647
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%), Gaps = 1/248 (0%)
Strand = Plus / Plus
Query: 1 atattttccagaaataaaaatcttttaatgttaagttaaatgaagataaggatgctttta 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattttccagaaataaaa-tcttttaatgttaagttaaatgaagataaggatgctttta 259
Query: 61 ttcaatgtgccttcagcaacagcgacacataataaagtattttattgcgtttaaattttc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttcaatgtgccttcagcaacagggacacataataaagtattttattgcgtttaaattttc 319
Query: 121 tcacctgaagagctaccacagttagagtatattaaagtaataaagttaccaattgcgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcacctgaagagctaccacagttagagtatattaaagtaataaagttaccaattgcgtaa 379
Query: 181 tgtagtgtagtggtcttgccatcaaagcacacttaagataaatccaactagattataatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtagtgtagtggtcttgccatcaaagcacacttaagataaatccaactagattataatt 439
Query: 241 tactgaga 248
||||||||
Sbjct: 440 tactgaga 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no366_m08.g1 MSMg01no366_m08.g1 CHROMAT_FILE:
MSMg01no366_m08.g1 PHD_FILE: MSMg01no366_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:42 2005
(243 letters)
>mm_chr3_137604909_137605552
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 acctcaagagagaacagtctagaagctgttgaaaagaaccctgacgtcaacgtggtcatt 60
|||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 444 acctcaagagagaatagtctagaaactgttaaaaagaaccctgacgtcaacgtggtcatt 385
Query: 61 tcccaggtctcacttgttttcttctctttaaggaaa-ggtatatcaggaggtcacattag 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 tcccaggtctcacttgttttcttctctttaaggaaatggtatatcaggaggtcacattag 325
Query: 120 aataacatcatgtcccaggagttcagtttgtgctgattatgggattgtgaaattttttta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aataacatcatgtcccaggagttcagtttgtgctgattatgggattgtgaaattttttta 265
Query: 180 tcttagggcccctggcctatgtagagtccgagccattcccataattccttgctgctacct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcttagggcccctggcctatgtagagtccgagccattcccataattccttgctgctacct 205
Query: 240 ctga 243
||||
Sbjct: 204 ctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
