NTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTT
GATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTTTTGTCCTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGT
TTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAGCCATTGC
TGTTCTGTTCAGGAATCTTTCCCCTGTACCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGAT
TCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATC
AAGTGACCATANGTGTGTGGGTTCATTTCTGGTTCTTCAATTCTATTCCA
TTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATTACAA
TTGCCCTGTAAAAAAGCTTTAAGTCACGGATGGGGATTTCCCCCCAAGGT
CTTTTTTCCTTTGAAAAGAAATTTTGTTTCTCCTACGCCTTTTGGTTTTC
CCAAATAACTTTTTAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXACTGAAATCCACTCATATTTGCTTCCAACATGCTGGGATTAAAG
GTACGTACCATCATATCTGGCCAGAACTACTCTGAGAAAGTTACAAATGG
ACAAATCTTTTTCTTAAATAACTGTTAACTGCAACATATCTTTGGCAGGG
ATCCTCAGTCGTACATTTTGTCTTTAAATGCCTCTCCCTCTGACCTCCTT
TCTCTCTCTTCTGGAACCTATATGTCTGGCTCTTGCTATGGATTCCCGCC
ACTCTTTTTTTTTAACTACCATTGTAGATCTGACCTGTGCTCTGTTCCTA
CTTCAATTCAAGGTCTCTCCTCTTACACTAGCCTTCCCTGTGCAAATGCC
TTCTTTTATAACTACTGAGAAGAGAAGCTCGCGTACCTCTGCCTCAACGG
AAGCACATTCCAAGCTCTCCCATTTTCATACAGAGCTGTGAGATCATTCA
CATCATTGCAACACTAACGTGGAAACGAACACAAAGCAGTGCCAAACCTT
AGTTGCCAACACGTCATTGAGCTTCTCAAAGGAAAAAACAAAAGAGCCAG
CATCTGCCCACTGACAGGACTGAGTTTTAATAGCTCTTTGTAAATAAAAA
TAAGTATACTAATGTGGGAAGAACTGTGGCCAAAACTGAAAGTTCCCTAC
AAGCCAAAACCTGGCCTGTGGGTTTAAAGAACTTCTAAAG

Query= MSMg01no367_h04.g1 MSMg01no367_h04.g1 CHROMAT_FILE:
MSMg01no367_h04.g1 PHD_FILE: MSMg01no367_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:37 2005
         (486 letters)



>mm_chr3_60429234_60430118
          Length = 885

 Score =  917 bits (474), Expect = 0.0
 Identities = 483/486 (99%), Gaps = 1/486 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgaaatccactcatatttgcttccaacatgctgggattaaaggtacgtaccatcatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 actgaaatccactcatatttgcttccaacatgctgggattaaaggtacgtaccatcatat 691

                                                                       
Query: 61  ctggccagaactactctgagaaagttacaaatggacaaatctttttcttaaataactgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ctggccagaactactctgagaaagttacaaatggacaaatctttttcttaaataactgtt 631

                                                                       
Query: 121 aactgcaacatatctttggcagggatcctcagtcgtacattttgtctttaaatgcctctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aactgcaacatatctttggcagggatcctcagtcgtacattttgtctttaaatgcctctc 571

                                                                       
Query: 181 cctctgacctcctttctctctcttctggaacctatatgtctggctcttgctatggattcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cctctgacctcctttctctctcttctggaacctatatgtctggctcttgctatggattcc 511

                                                                       
Query: 241 cgccactctttttttttaactaccattgtagatctgacctgtgctctgttcctacttcaa 300
            ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgccactctttttttt-aactaccattgtagatctgacctgtgctctgttcctacttcaa 452

                                                                       
Query: 301 ttcaaggtctctcctcttacactagccttccctgtgcaaatgccttcttttataactact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttcaaggtctctcctcttacactagccttccctgtgcaaatgccttcttttataactact 392

                                                                       
Query: 361 gagaagagaagctcgcgtacctctgcctcaacggaagcacattccaagctctcccatttt 420
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 391 gagaagagaagctcgcgtacctctgcctcaactgaagcacattccaagctctcccatttt 332

                                                                       
Query: 421 catacagagctgtgagatcattcacatcattgcaacactaacgtggaaacgaacacaaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 catacagagctgtgagatcattcacatcattgcaacactaacgtggaaacgaacacaaag 272

                 
Query: 481 cagtgc 486
           ||||||
Sbjct: 271 cagtgc 266


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 885
Length adjustment: 10
Effective length of query: 476
Effective length of database: 875
Effective search space:   416500
Effective search space used:   416500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)