Query= MSMg01no368_b13.b1 MSMg01no368_b13.b1 CHROMAT_FILE:
MSMg01no368_b13.b1 PHD_FILE: MSMg01no368_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:26 2005
(510 letters)
>mm_chr3_126106652_126107564
Length = 913
Score = 920 bits (476), Expect = 0.0
Identities = 501/510 (98%), Gaps = 3/510 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgcaacgctgagaacccatccagagtactaaattcaactcaaagtgccaggtt 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgcaatgctgagaacccatccagagtactaaattcaactcaaagtgccaggtt 263
Query: 64 tgctctggcaagcacagaccatgatgcctggcaaagtaaccaactcaagagga-gggagc 122
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 264 agctctggcaagcacagaccatgatgcctggcaaagtaaccaactcaagaggaggggagc 323
Query: 123 aatccttacatgtgtgacgaactctgggg--gggtggttctgtactttctgagattctaa 180
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 324 aatccttacatgtgtgacgaactctgggggaggggggttctgtactttctgagattctaa 383
Query: 181 gcaaggagagcctgggtgaacattaaattgaacccattattagtaactacctcagatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcaaggagagcctgggtgaacattaaattgaacccattattagtaactacctcagatggc 443
Query: 241 ctggagtgaggggccagttcttagtagttagtgcatgttgtgcaacttcgcacacctgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctggagtgaggggccagttcttagtagttagtgcatgttgtgcaacttcgcacacctgcc 503
Query: 301 tgagactggactccagaagacacctaagaagccagagcaaacctgtgcatgtctgtaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgagactggactccagaagacacctaagaagccagagcaaacctgtgcatgtctgtaatc 563
Query: 361 cctgcactggggacaatggacacaagagactgtatgtagccaagggtagccttgaatttc 420
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctgcactggagacaaaggacacaagagactgtatgtagccaagggtagccttgaatttc 623
Query: 421 atgatcttcctgccttagcctgatgagtcttgtaccatcgtgcccaattctgaagtaatt 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 624 atgatcttcctgccttagcctgatgagtcttgcaccatcgtgcccaattctgaagtaatt 683
Query: 481 gttactacactatcatgacttgactcttgt 510
||||||||||||||||||||||||||||||
Sbjct: 684 gttactacactatcatgacttgactcttgt 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 913
Length adjustment: 10
Effective length of query: 500
Effective length of database: 903
Effective search space: 451500
Effective search space used: 451500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_b13.g1 MSMg01no368_b13.g1 CHROMAT_FILE:
MSMg01no368_b13.g1 PHD_FILE: MSMg01no368_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:27 2005
(471 letters)
>mm_chr3_126288780_126289650
Length = 871
Score = 826 bits (427), Expect = 0.0
Identities = 460/471 (97%)
Strand = Plus / Minus
Query: 1 agttcccagtccccatgctatgtggcttagcattgcctgttattctatcttcaagagttc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 862 agttcccagtccccatgctatgtggcttagcattgcctgtaattctatcttcaagagttc 803
Query: 61 tgatgtcctcagctagcctgtaaggcaacctgcactcatgtggcacacacagtcatatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 802 tgatgtcctcagctagcctgtaaggcaacctgcactcatgtggcacacagagtcatatgc 743
Query: 121 acacccagtcatatacacacacatgcacatacatatacacacagaaacactcacacacat 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 742 acacccagtcatatacacacacatgcacatacatatacacacaggaacactcacacacat 683
Query: 181 acaatcacacataatgtttaaagtattcatgggattttctggtgaaatgggcacaggaga 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 682 ataatcacacataatgtttaaagtattcatgggattttctggtgaaatgggcataggaga 623
Query: 241 ttgctctaaggtaggatgaacaaagttagatctagatcgtgagtaggaactaactaggtg 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttgctctaagggaggatgaacaaagttagatctagatcgtgagtaggaactaactaggtg 563
Query: 301 atgtgtaaaagatatcattccaggagatgaaacatgtcaattcacaaattcaaggaatgg 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 562 atgtgtaaaagatatcattccaggagatgcaacatgtcaattcacaaattcaaggaatgg 503
Query: 361 aaggatgcccagagtggctaacatacagagagagcagaatgagtcagtgagactgggaga 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 502 aaggatgcccagagtggctaacgtacagagagagcagaatgagtcagtgagacagggaga 443
Query: 421 cacttcaagaatggctgtatatgatcgttctgaactgtattcattctggct 471
|| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 442 catttcaagaatggctgtatgtgatcgttctgaactgtattcattctggct 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
