Query= MSMg01no368_b22.b1 MSMg01no368_b22.b1 CHROMAT_FILE:
MSMg01no368_b22.b1 PHD_FILE: MSMg01no368_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:28 2005
(484 letters)
>mm_chr3_13072127_13073010
Length = 884
Score = 837 bits (433), Expect = 0.0
Identities = 468/480 (97%)
Strand = Plus / Plus
Query: 5 gaattctccaactttgtctagccagacagtacaatagcaatcactgcttagacatcaagc 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattatccaactttgtctagccagacagtacaatagcaatcactgcttagacatcaagc 264
Query: 65 ataaatttctaaatcccaataaaattaaaacatccttttgtattaaccacatattaaatt 124
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 ataaatttccaaatcccaataaaattaaagcatccttttgtattaaccacatattaaatt 324
Query: 125 ataatatttataagaagtacatatcataatatattttagtacaaaaatttgaaatttaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataatatttataagaagtacatatcataatatattttagtacaaaaatttgaaatttaag 384
Query: 185 ctctcatataaaaaacaagatacaatttgtacacatgatccactttttttctatcatcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctctcatataaaaaacaagatacaatttgtacacatgatccactttttttctatcatcat 444
Query: 245 tttctaaatggtttcatttaatatcaatttgttattttaaaatgctataaaatcttacag 304
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 tttctgaatggtttcatttaatatcaatttgttattttaaaatgccataaaatcttacag 504
Query: 305 tcccatcattaaaactatagctcataggtcacatttggtaggaaaatggaagatcagatc 364
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 tcccatcattaaaactatagctcataggtgacatttggtaggaaaatggaagatcagatc 564
Query: 365 ctagcctttacctttatcttcttatctaaatttgcatgtctttccttcaaaattatggag 424
|||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 ctagactttacccttatcttcttatctaaattcacatgtctttccttcaaaattatggag 624
Query: 425 aataaaaaggttcactgtanatgaacatgtgctacaaatccccgtctttacactctaatg 484
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 aataaaaaggttcactgtaaatgaacgtgtgctacaaatccccgtctttacactctaatg 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_b22.g1 MSMg01no368_b22.g1 CHROMAT_FILE:
MSMg01no368_b22.g1 PHD_FILE: MSMg01no368_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:28 2005
(480 letters)
>mm_chr3_13239841_13240719
Length = 879
Score = 857 bits (443), Expect = 0.0
Identities = 466/474 (98%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 5 agaaaagaatgacaaatgattattttatcagttaaaatgtatcagaaaaaaataatctgt 64
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 677 agaaaagaatggcaaatgattattttatcagttaaaatgtatcag-aaaaaataatctgt 619
Query: 65 attatctcacagatttcaggaatagctgctgataacagcaacagaacaaaataagttcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 attatctcacagatttcaggaatagctgctgataacagcaacagaacaaaataagttcct 559
Query: 125 atacctttgaattaaaatctatttttggagactggttttgcagtgtgaaataaagctatc 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 558 atacctttgaattaaaatctatgtttggagactggttttgcagtgtgaaataaagctatc 499
Query: 185 aatccatcagtttatccatatgtatttttttctttcagtcagtatcaggagacagaaatc 244
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 498 aatccatcagtttatccatatgtatttttttctttcagttagtatcaggagacagaaatc 439
Query: 245 cgaagctctctgctaatgatttccttagtaaacctttgtctacctgcagtgctaatctcc 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 caaagctctctgctaatgatttccttagtaaacctttgtctacctgcagtgctaatctcc 379
Query: 305 agctttgaattcatgatgagatctactttgtttgggatttgtttccatcaacatttcatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agctttgaattcatgatgagatctactttgtttgggatttgtttccatcaacatttcatc 319
Query: 365 tcttctatttttattttaacaatgtgatgtggagctaanagtcagcctgctaagacagca 424
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 318 tcttctatttttattttaacaatgtgatgtggagctaaaagtcagcctgctaagacagca 259
Query: 425 tctcacacccactttcctctgtcagcctcttttatatcacattccacagcagta 478
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 258 tctcacacccactttcccctggcagcctcttttatatcacattccacagcagta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 879
Length adjustment: 10
Effective length of query: 470
Effective length of database: 869
Effective search space: 408430
Effective search space used: 408430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
