Query= MSMg01no368_f15.b1 MSMg01no368_f15.b1 CHROMAT_FILE:
MSMg01no368_f15.b1 PHD_FILE: MSMg01no368_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:46 2005
(622 letters)
>mm_chr3_30805601_30806622
Length = 1022
Score = 1166 bits (603), Expect = 0.0
Identities = 615/619 (99%)
Strand = Plus / Minus
Query: 4 ggaattccaggcttccacgacgttgcagatgagttcagggcacaagagattgatgggcag 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ggaattccaggctgccaggacgttgcagatgagttcagggcacaagagattgatgggcag 763
Query: 64 gccctgctcttgctaaaagaagaccatctcatgagtgcaatgaacatgaagctgggccca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gccctgctcttgctaaaagaagaccatctcatgagtgcaatgaacatgaagctgggccca 703
Query: 124 gccctgaagatttgtgcacgcatcaactctctgaaggactcttaacaggagcgaggcttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gccctgaagatttgtgcacgcatcaactctctgaaggactcttaacaggagcgaggcttt 643
Query: 184 gtgcttctcagcccattcctctcacaaggtgaaggtaaagccttgctgggattctctcct 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 642 gtgcttctcagcccattcctctcacaaggtgaaggtaaagcctcgctgggattctctcct 583
Query: 244 gagaatatcagactgatggaggaaggccgagtgcactgggaccgccacggccagtgccga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gagaatatcagactgatggaggaaggccgagtgcactgggaccgccacggccagtgccga 523
Query: 304 cgtttctcttcagatgtcctaactcatcatacattttcataattagtgaacatcggtgac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cgtttctcttcagatgtcctaactcatcatacattttcataattagtgaacatcggtgac 463
Query: 364 attaattttaccacttacatgctacactgaaagacttgttacagaggcccatatttttca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 attaattttaccacttacatgctacactgaaagacttgttacagaggcccatatttttca 403
Query: 424 aagaaacatgttatactagataattttttaaaggtaatgtttatcattaatataaaaaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aagaaacatgttatactagataattttttaaaggtaatgtttatcattaatataaaaaaa 343
Query: 484 ccttttaaaaataattattgatttacactccccctcctttaattctcttttcttatatgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 342 ccttttaaaaataattattgatttacactccccctcctttaattctcttttcttatacgt 283
Query: 544 tttcctacccagttagttttctaaatgttgtcatagagatataggataatttaggagccc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tttcctacccagttagttttctaaatgttgtcatagagatataggataatttaggagccc 223
Query: 604 attgacagaactgaatgca 622
|||||||||||||||||||
Sbjct: 222 attgacagaactgaatgca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_f15.g1 MSMg01no368_f15.g1 CHROMAT_FILE:
MSMg01no368_f15.g1 PHD_FILE: MSMg01no368_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:46 2005
(513 letters)
>mm_chr3_30635988_30636899
Length = 912
Score = 953 bits (493), Expect = 0.0
Identities = 508/513 (99%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 1 agccttaaaaagaagaaatctgactctggtccagtgtggatgaaccgtgaggacctcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccttaaaaagaagaaatctgactctggtccagtgtggatgaaccgtgaggacctcaca 260
Query: 61 ctgaatgcaataagcagtcacaggaggaacaacactgcacagttgtgtttgtacgtgctg 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 ctgaatgcaataagcagtcacaggaggaacaacactgcacagttgagtttgtacgtgctg 320
Query: 121 cctggattagtcagatttctagagatagaaagcacaacttcagttgtccagaacaggaga 180
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 321 cctggattagtcagatttctagagataaaaagcacaacttcagttgtccaggacaggaga 380
Query: 181 gaatttaacacacttggggtttcagtttggcaagagtaagatcaaaggccagctatctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatttaacacacttggggtttcagtttggcaagagtaagatcaaaggccagctatctcc 440
Query: 241 agcaatgtaaatggacttgctcctgagttacatacacacttaaaattgggtaagccagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaatgtaaatggacttgctcctgagttacatacacacttaaaattgggtaagccagca 500
Query: 301 aatactctggtatttcactgcaattaaaaaagaaaaagaaaaaaaacaacaactagatag 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 aatactctggtatttcactgcaattaaaaaagaaaaagaaaaaaa-caacaactagatag 559
Query: 361 ctcatggcatgggccctcatcatagtggccgccatctggccgtacagtattagtatctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 560 ctcatggcatgggccctcatcatagtggccgccatctggccgtacagtattggtatctga 619
Query: 421 ggttggcttgaaacaggatacagctcgagccagaagccagggagatcacagaaggagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggttggcttgaaacaggatacagctcgagccagaagccagggagatcacagaaggagcag 679
Query: 481 agaccccaggaatcatctgaggtctcttcagtg 513
|||||||||||||||||||||||||||||||||
Sbjct: 680 agaccccaggaatcatctgaggtctcttcagtg 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space: 453706
Effective search space used: 453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
