Query= MSMg01no370_b17.b1 MSMg01no370_b17.b1 CHROMAT_FILE:
MSMg01no370_b17.b1 PHD_FILE: MSMg01no370_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:02 2005
(518 letters)
>mm_chr3_69152997_69153908
Length = 912
Score = 899 bits (465), Expect = 0.0
Identities = 500/515 (97%), Gaps = 6/515 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaaaggacggcaatggaggcaagagatgttccctaggtctccttaggctcacat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ggaattcaaaggacggcaatggaggcaagagatgttccctaggtctccttaggctcacat 653
Query: 64 catttttacatgaaggcagagacagcgcacacctttaccctacaacacacagaaaacatt 123
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 catttttacataaaggcagagacagcgcacacctttaccctacaacacacagaaa----- 598
Query: 124 caaggaaagcaagcccacaggtacacattccaatgctcccaaaacagggttctcctatgt 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 -aaggaaagcaagcccacaggtacacattccaatgctcccaaaacagggttctcctatgt 539
Query: 184 tcccagcttggggttgaaggcgcaggttaagagcaggtattccctggagctgactggttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tcccagcttggggttgaaggcgcaggttaagagcaggtattccctggagctgactggttc 479
Query: 244 cctgcttggaagaaagttatttctttcctccgagagaagtttgggtttagagacttatgg 303
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 478 cctgcttggaagaaagttatttctttcctccgagaggagttcgggtttagagacttatgg 419
Query: 304 gggccatgcaacagttttcccctcagatctgtagtgctactttagcaagacttccctgag 363
||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 418 gggccatgcaacagttttcccctcagatctgtagtgctattttagcaagaattctctgag 359
Query: 364 atccaagaactgcagatgaaacccgtgagggaagccctgtgaggcttagagtagagataa 423
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acccaagaactgcagatgaaagccgtgagggaagccctgtgaggcttagagtagagataa 299
Query: 424 gtgagcaaatattttcaatcctctaaaactaaaaagataagcaagaataaaactgggcag 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 298 gtgagcaaatattttcaatcctctaaaactaaaaagataagcaagaataaaactaggcag 239
Query: 484 tactgagctatttagcttcagtttaacttgtaaat 518
|||||||||||||||||||||||||||||||||||
Sbjct: 238 tactgagctatttagcttcagtttaacttgtaaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 912
Length adjustment: 10
Effective length of query: 508
Effective length of database: 902
Effective search space: 458216
Effective search space used: 458216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_b17.g1 MSMg01no370_b17.g1 CHROMAT_FILE:
MSMg01no370_b17.g1 PHD_FILE: MSMg01no370_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:02 2005
(258 letters)
>mm_chr3_68975190_68975847
Length = 658
Score = 499 bits (258), Expect = e-146
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 ttttctttttatttatttaaaagaagatgtacaataaatcttgtggaaaataagcaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttctttttatttatttaaaagaagatgtacaataaatcttgtggaaaataagcaatat 260
Query: 61 attttacacacatacgtacacacagaggggagagagttggggtgagagagaaatacacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttacacacatacgtacacacagaggggagagagttggggtgagagagaaatacacag 320
Query: 121 agacagagaaagagacagagacagagagaatggtgaagatagacacacatacacatagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacagagaaagagacagagacagagagaatggtgaagatagacacacatacacatagga 380
Query: 181 ctggggattctgccttattgatcagggtctctgtcttgtaacagtgtctctcactgacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggggattctgccttattgatcagggtctctgtcttgtaacagtgtctctcactgacct 440
Query: 241 tggagacagcctgactgt 258
||||||||||||||||||
Sbjct: 441 tggagacagcctgactgt 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
