Query= MSMg01no370_c06.b1 MSMg01no370_c06.b1 CHROMAT_FILE:
MSMg01no370_c06.b1 PHD_FILE: MSMg01no370_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:05 2005
(524 letters)
>mm_chr3_81924214_81925137
Length = 924
Score = 934 bits (483), Expect = 0.0
Identities = 492/495 (99%)
Strand = Plus / Plus
Query: 4 ggaattcagggtatcaacaataccaactgggtgcattaaggatttcttactcttgaaata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagggtatcaacaataccaactgggtgcattaaggatttcttactcttgaaata 263
Query: 64 cccaaaaccacaaattaaaaatgaaaagaaaagctttcatgtctgctaattcttacacgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cccaaaaccacaaattaaaaatgaaaagaaaagctttcatgtctgctaattcttacacgt 323
Query: 124 ctagcataagcaccgaaaacttcagatgtacttttaatccttagagcatagaatacaggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctagcataagcaccgaaaacttcagatgtacttttaatccttagagcatagaatacaggt 383
Query: 184 attcccaacccagagggccagaaacgtcaggtgattttctctcatttgattgctagaaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attcccaacccagagggccagaaacgtcaggtgattttctctcatttgattgctagaaac 443
Query: 244 atttcacaagaaagtccatctgtatgttttctattactacgagttcactccaatgggctg 303
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atttcacgagaaagtccatctgtatgttttctattactacgagttcactccaatgggctg 503
Query: 304 agttcataaagtaagattagcttatattgaaaataggatttaaatatctacattaaaatc 363
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agttcataaagtaatattagcttatattgaaaataggatttaaatatctacattaaaatc 563
Query: 364 agtcaaaatctaaggtttggcctttttttttctctcaatatagagaatagctatgtggat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtcaaaatctaaggtttggcctttttttttctctcaatatagagaatagctatgtggat 623
Query: 424 tgagaaagacctagccatgaaaggctttcaccagattaatatatatatatatatatatat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 624 tgagaaagacctagccatgaaaggctttcaccagattaatatatatatatatatacatat 683
Query: 484 atatatatatatata 498
|||||||||||||||
Sbjct: 684 atatatatatatata 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_c06.g1 MSMg01no370_c06.g1 CHROMAT_FILE:
MSMg01no370_c06.g1 PHD_FILE: MSMg01no370_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:05 2005
(418 letters)
>mm_chr3_81950711_81951528
Length = 818
Score = 675 bits (349), Expect = 0.0
Identities = 405/433 (93%), Gaps = 15/433 (3%)
Strand = Plus / Minus
Query: 1 cttttttccttttctctttctctcttcccaatcctgaccactaggaaagcctttgaacag 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 818 cttttttccttttctctttctctcttcccaatcctgactactaggaaagcctttgaacag 759
Query: 61 aaaaggttgacaaaaagcctagtcccacattactgacattcctgaaagctgccccaaccc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 aaaaagttgacaaaaagcctagtcccacattactgacattcctgaaagctgccccaaccc 699
Query: 121 cactcacctgaagtcagcactcacccaggcctccctcacaagttctgcgtgtggcagatg 180
| ||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |
Sbjct: 698 ccctcacctgaagtcagcactcaccaaggcctccctcaggagttctgcatgtggcagacg 639
Query: 181 catcc---------------ttttttttttttttttttgcctacagtttatacaaaactt 225
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 catcctttttttttttttttttttttttttttttttttgcctacagtttatacaaaactt 579
Query: 226 ccttgccatagtcttcctgagacttcttctgttttctattctcaatagagtgaagacaca 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ccttgccatagtcttcctgagacttcttctgttttctattctcaatagagtgaagacaca 519
Query: 286 tgggctttcccctacatgccatccttatgtcagtgtcagacctgaagatgctgtaagact 345
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 518 tgggctttcccctacatgccatccttatatcagtgtcagatctgaagatgctgtaagact 459
Query: 346 aaagtgtcccttatctgctcaacatgtcctatctcagaagggaaggaccatgggaaaaag 405
||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 458 aaagtgtcccttatctgctcagcacgtcctatctcagaagggaaggaccatgggaaagag 399
Query: 406 ggacatcagtgta 418
|||||||||||||
Sbjct: 398 ggacatcagtgta 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
