GATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGCTTAGCTCTATAACCCATTTTTT
AATAGGGTTGTCTGGTATTCTGGAGTCCAACTTCTTGATCAAAATATATA
TATTGTATATTAATTAGCCCACTATCGGATTTAGAATTGGTAAAGATCTT
TTCCCAATCTGTTGGTTGCTGTTTTGTCTTATTGACAGCGTACTTTGCCT
TAGAGAAGCTTTGCAATTTTATAAGATCCAATTTGTCAATTCTCGATCTT
ACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTCCCCTGTGCCCATA
TCTTCAAGACTCTTCCTCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGG
TTTTATGTGGAGTTCCTTGATCCACTTAGACTTGAGCTTTGTACAAGGAA
TAAGAATGGATCAATTCACATTCTTCTACATGCTAACCACCATTTGAGGC
AGCACCATCTGTTGAAAATGCTGCGTTTTTTCCACTGGATGGTTTTAGCT
CCTTTATCAAAGATCAAGTGACCGTAGGTGTGTGGGTATATTTCTGGGTC
TTCCGTTCTATTCCATTGATCTACCTGTCTGTCCCTGTATCAGCACCATG
GAGTTTTTAATCCCAATTGGTCCGTAAACTTCTTGGAGCCCCGCCATGCG
AATTCCACCACATTTCTCTTTATTTCTATCATAATGTTTTGCCCCCCTCC
G

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCTAAACACATTTCTGGTAAATCGATGGACAGGATGAGAGCTCAATGC
TGTGAAGGCTCTTGATGGGTTGTCAGTGACCTGAGACTATAAAGATAAAA
TTCCTGGCAAAGAGAATCTGGGAATCATCTTTTTGGTATGTACATAGAGA
ATTTTCCTACGAAACCCAACTTTGAATATGCTAGAGCACAGAATTATTTT
TAAATTCTTTAAAAATATTTTTTATTAAATTTGTTCTCTGACAATTTCAT
ACATATGTATAATGCATTCTGGTTAGGCCCATAGAGGTGGCACTGTTAAG
AGGTATGGCCTTGTTGGAGTGGGTATGGCTTTGTTAGAGAAAGTGTGTCA
CTGTGGGTGGTCTTTGAGGTCTCAGATGCTCAAGCCAGGTCCAGTGTCTC
ACTCCCTACCCGCTCTCTTCCTGATTCGAATGCAGAACTCTTAGCTGCCT
CAGGCACTATAAACACCTACATGCTGCCATGCTTCTTGCCACGATGATAA
TGGACTAAACCTCTGAACTCAGCCCCAGTTAAATGCTTTCCTTTATAGGA
GTTGCTGTGGTCATGGTGTCTCTTCACAGCAACAGATACCCACAGACAGC
ATTCTCCTTTTATGTCCTTCATTTTCCCTACAGATCCCTTTCCTATATTT
TTGGCCTTTTTGTTTTATTTTGTGTCCCGGCTGAGGTTAACCAGGGTCTG
GGAATTGGGN

Query= MSMg01no371_a04.g1 MSMg01no371_a04.g1 CHROMAT_FILE:
MSMg01no371_a04.g1 PHD_FILE: MSMg01no371_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:15 2005
         (572 letters)



>mm_chr3_38450835_38451806
          Length = 972

 Score = 1106 bits (572), Expect = 0.0
 Identities = 572/572 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaaatcgatggacaggatgagagctcaatgctgtgaaggctcttgatgggttgtcagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaaatcgatggacaggatgagagctcaatgctgtgaaggctcttgatgggttgtcagtg 260

                                                                       
Query: 61  acctgagactataaagataaaattcctggcaaagagaatctgggaatcatctttttggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctgagactataaagataaaattcctggcaaagagaatctgggaatcatctttttggta 320

                                                                       
Query: 121 tgtacatagagaattttcctacgaaacccaactttgaatatgctagagcacagaattatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtacatagagaattttcctacgaaacccaactttgaatatgctagagcacagaattatt 380

                                                                       
Query: 181 tttaaattctttaaaaatattttttattaaatttgttctctgacaatttcatacatatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaattctttaaaaatattttttattaaatttgttctctgacaatttcatacatatgt 440

                                                                       
Query: 241 ataatgcattctggttaggcccatagaggtggcactgttaagaggtatggccttgttgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatgcattctggttaggcccatagaggtggcactgttaagaggtatggccttgttgga 500

                                                                       
Query: 301 gtgggtatggctttgttagagaaagtgtgtcactgtgggtggtctttgaggtctcagatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgggtatggctttgttagagaaagtgtgtcactgtgggtggtctttgaggtctcagatg 560

                                                                       
Query: 361 ctcaagccaggtccagtgtctcactccctacccgctctcttcctgattcgaatgcagaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaagccaggtccagtgtctcactccctacccgctctcttcctgattcgaatgcagaac 620

                                                                       
Query: 421 tcttagctgcctcaggcactataaacacctacatgctgccatgcttcttgccacgatgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttagctgcctcaggcactataaacacctacatgctgccatgcttcttgccacgatgat 680

                                                                       
Query: 481 aatggactaaacctctgaactcagccccagttaaatgctttcctttataggagttgctgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatggactaaacctctgaactcagccccagttaaatgctttcctttataggagttgctgt 740

                                           
Query: 541 ggtcatggtgtctcttcacagcaacagatacc 572
           ||||||||||||||||||||||||||||||||
Sbjct: 741 ggtcatggtgtctcttcacagcaacagatacc 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)