Query= MSMg01no371_m10.b1 MSMg01no371_m10.b1 CHROMAT_FILE:
MSMg01no371_m10.b1 PHD_FILE: MSMg01no371_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:21 2005
(536 letters)
>mm_chr3_15039597_15040533
Length = 937
Score = 930 bits (481), Expect = 0.0
Identities = 523/537 (97%), Gaps = 1/537 (0%)
Strand = Plus / Plus
Query: 1 atcagcttattatgatttctcctgatctgttgcacatgaatattctcaaacatttccttt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 atcagcttattatgatttctcctgatgtgttgcacatgaatattctcaaacatttccttt 260
Query: 61 gcttttcagaaactattaaagaagtgagaataagatgaactaggctcctgtttgttccct 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttttcagaaactattaatgaagtgagaataagatgaactaggctcctgtttgttcccg 320
Query: 121 tatgcaacggtcaggcaaagtttcaggtatttatcctgatgtaaattatcagcaggagca 180
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgcaacggtcaggcaaagtttcaggaatttatcctgatgtaaattatcagcaggagca 380
Query: 181 tctcaggaagcagttaatgaagaatataattttagcatcagaatataatcagttatgata 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tctcaggaagcagttaatgaagaatatgattttagcatcagaatataatcagttatgata 440
Query: 241 aatattttcaatatatattatgttttcaaactccctaacaatggtgtagtcaccaatagg 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 aatattttcaatatatattatgttttcaaactccctaacaatggtgtactcaccaatagg 500
Query: 301 tgtaaacaaccttaaggaagcagtgtgaagacagaacagcagacagaattaagcccagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaaacaaccttaaggaagcagtgtgaagacagaacagcagacagaattaagcccagac 560
Query: 361 agttatctttatgaagcctattaaagca-aaaaatagaaactttcttgtgtggtcaaatt 419
|||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 agttatctttatgatgcctattaaagcggaaaaatagaaactttcttgtgtggtcaaatt 620
Query: 420 gttatctttcattaaatttgaatatatcatcttctttttaagttctacaatcattcggag 479
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 621 gttatctttcattaaatttgaatatatcatcttctttgtaagtcctacaatcattcggag 680
Query: 480 caaagtctgcctttagtccctgctgaattaaatatttacacactcgcagcgcatatg 536
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 681 caaagtctgcctttagtccctgctgaattaaatatttacacactcgcagcacatatg 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 937
Length adjustment: 10
Effective length of query: 526
Effective length of database: 927
Effective search space: 487602
Effective search space used: 487602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_m10.g1 MSMg01no371_m10.g1 CHROMAT_FILE:
MSMg01no371_m10.g1 PHD_FILE: MSMg01no371_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:21 2005
(245 letters)
>mm_chr3_15228867_15229515
Length = 649
Score = 294 bits (152), Expect = 3e-84
Identities = 176/186 (94%), Gaps = 4/186 (2%)
Strand = Plus / Minus
Query: 64 aataatattttttctacaaaattcacagaggctcccatatttcatggaacttgattaaat 123
|||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 449 aataatatttttcccacaaaattcacagaggttcccacatttcatggaacttgattaaat 390
Query: 124 tactgctgcttcttggcacctatcaataataaggtccaatcaaataaaaagacaaaaaaa 183
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 389 tactgctgcttcttggcacctaccaataataaggtccactcaaataaaaagacaaaaaaa 330
Query: 184 aa----tggtgttttcctaggtctggttgactgctgaaagacagattcagtgacaaagct 239
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaaaattggtgttttcctaggtctggttgactgctgaaagacagattcagtgacaaagct 270
Query: 240 ggctgg 245
||||||
Sbjct: 269 ggctgg 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 649
Length adjustment: 9
Effective length of query: 236
Effective length of database: 640
Effective search space: 151040
Effective search space used: 151040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
