Query= MSMg01no372_b14.b1 MSMg01no372_b14.b1 CHROMAT_FILE:
MSMg01no372_b14.b1 PHD_FILE: MSMg01no372_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:46 2005
(526 letters)
>mm_chr3_90512002_90512927
Length = 926
Score = 978 bits (506), Expect = 0.0
Identities = 521/526 (99%), Gaps = 1/526 (0%)
Strand = Plus / Minus
Query: 1 ttgtgaaaatccaccacagagactcccttaaaagaacccagtctccaactgtggctacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ttgtgaaaatccaccacagagactcccttaaaagaacccagtctccaactgtggctacca 804
Query: 61 catacaggagcatatacaacaaaaataaagtaaattaattaaggctaaaaaaaattaaat 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 803 catacaggagcatatacaacaaaaataaagtaaattaattaaggct-aaaaaaattaaat 745
Query: 121 gtaaaattttaaaaattagagtccaaaagactgccgaagctgtcatgacatagacaggcc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtaaaatttttaaaattagagtccaaaagactgccgaagctgtcatgacatagacaggcc 685
Query: 181 ataaggtggcagcatatgcattctgataatcctgatgtcactttctacccaacaggaatc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684 ataaggtggcagcatatgcattctgataatcctgatgtcaccttctacccaacaggaatc 625
Query: 241 tccctcacagtctaatccctcgtcttccctgatgtgtcctgtgttgcacaacttcttaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tccctcacagtctaatccctcgtcttccctgatgtgtcctgtgttgcacaacttcttaat 565
Query: 301 tgtagaaaataaccttctaaaatacattctatcaaaaccaacacagtcttcgttgtgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtagaaaataaccttctaaaatacattctatcaaaaccaacacagtcttcgttgtgttt 505
Query: 361 agccaatgtttatctgtctcctgcaggcaaaacttatctagtgatgagttagcaggttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agccaatgtttatctgtctcctgcaggcaaaacttatctagtgatgagttagcaggttaa 445
Query: 421 taatgcagtaagggagacagaccaaaaaagccaataattataatgtccacagtgtggtga 480
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 444 taatgcagtaagggagacagaccgaaaaagccaataattataatgtccacagtgtgctga 385
Query: 481 ttggaaaagcctgttattttctacaaagggttgtagacttcaagga 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttggaaaagcctgttattttctacaaagggttgtagacttcaagga 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_b14.g1 MSMg01no372_b14.g1 CHROMAT_FILE:
MSMg01no372_b14.g1 PHD_FILE: MSMg01no372_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:46 2005
(426 letters)
>mm_chr3_90325511_90326336
Length = 826
Score = 801 bits (414), Expect = 0.0
Identities = 423/426 (99%)
Strand = Plus / Plus
Query: 1 aaggcctgcttgggccatatagtctttgtctcaaaacaaaataacaatcaggtagaaccc 60
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aaggcctacttgggccatatagtctttgtctcaaaacaaaataacaatcaagtagaaccc 260
Query: 61 aaagtaattttctgtgctagatgtgaagagaaagaaatttgtttttttattttccaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagtaattttctgtgctagatgtgaagagaaagaaatttgtttttttattttccaatca 320
Query: 121 attccttagttcagttttcttagaggtggcccaaaagtgacatctgtgtgtaagtgtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attccttagttcagttttcttagaggtggcccaaaagtgacatctgtgtgtaagtgtatc 380
Query: 181 taagttagggttttattgctgtgaacagacaccatgaccaaggtaactcttataaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagttagggttttattgctgtgaacagacaccatgaccaaggtaactcttataaggaga 440
Query: 241 acatttaattggggctggcttaaaggttcagaggttcagttcattatcatcaaggtggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatttaattggggctggcttaaaggttcagaggttcagttcattatcatcaaggtggga 500
Query: 301 gcatgatagtatctaggcaggcaggcatggtgcaggaagagctgagagttctacatcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatgatagtatctaggcaggcaggcatggtgcaggaagagctgagagttctacatcttc 560
Query: 361 atctgaaagctgctagcagaatactggcttccaggcagctaggatgagggtcttatggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 atctgaaagctgctagcagaatactggcttccaggcagctaggatgagggtattatggct 620
Query: 421 cacacc 426
||||||
Sbjct: 621 cacacc 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
