Query= MSMg01no372_c10.b1 MSMg01no372_c10.b1 CHROMAT_FILE:
MSMg01no372_c10.b1 PHD_FILE: MSMg01no372_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:50 2005
(592 letters)
>mm_chr3_120339949_120340938
Length = 990
Score = 1104 bits (571), Expect = 0.0
Identities = 584/589 (99%), Gaps = 2/589 (0%)
Strand = Plus / Plus
Query: 4 ggaattccacgtgcatttttatgcatttgtgagtgtcttccattttccttctccaatttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacgtgcatttttatgcatttgtgagtgtcttccattttccttctccaatttg 263
Query: 64 ctttataaaaatagacccccttccttgagctaagggtgggaaaaaaaatccttgcacaaa 123
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 264 ctttataaaaatagacccccttccttgagctaagggtgggaaaaaa--tccttgcacaaa 321
Query: 124 ataatctgatgtgtttatatttgagtttctaaatataattcatactatgttcatctatca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ataatctgatgtgtttatatttgagtttctaaatataattcatactatgttcatctatca 381
Query: 184 tgggctcatttatcatttattctttgtagtgtggttacaattacaacattctggaagaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgggctcatttatcatttattctttgtagtgtggttacaattacaacattctggaagaaa 441
Query: 244 ggcagcttttctgactcctaaatgcccctgggtctttcatggctcgctgagcagttataa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggcagcttttctgactcctaaatgcccctgggtctttcatggctcgctgagcagttataa 501
Query: 304 atgaaatacatttaactcaatgggttggagattcccgcaatgcaatttcagtttacaggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgaaatacatttaactcaatgggttggagattcccgcaatgcaatttcagtttacaggt 561
Query: 364 aaagctggttatcactacaagctgataaactgtgctggcagagtcatttacaaggaactg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aaagctggttatcactacaagctgataaactgtgctggcagagtcatttacaaggaactg 621
Query: 424 cttctatttttcggcgctctttatattgactcataattccataatacggtttgtaattta 483
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 622 cttctatttttcggcgctctttatattaactcataattccataatacggtttgtaattta 681
Query: 484 cgtttctcatattacaaggatggctgtgacttcaccctttcctaactcctgggactcaag 543
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 682 cgtttctcatattacaaggatggctgtgacttcaccctttcctcactcctgggactcaag 741
Query: 544 tgacagcaagttttgttttgaaacatggagggggtattgtcccttctgt 592
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 taacagcaagttttgttttgaaacatggagggggtattgtcccttctgt 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 990
Length adjustment: 10
Effective length of query: 582
Effective length of database: 980
Effective search space: 570360
Effective search space used: 570360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_c10.g1 MSMg01no372_c10.g1 CHROMAT_FILE:
MSMg01no372_c10.g1 PHD_FILE: MSMg01no372_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:50 2005
(532 letters)
>mm_chr3_120382368_120383299
Length = 932
Score = 1006 bits (520), Expect = 0.0
Identities = 529/532 (99%)
Strand = Plus / Minus
Query: 1 cacacaagtagctcagattcacccagaagatagaaaattcatcttcaaaggaacaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cacacaagtagctcagattcacccagaagatagaaaattcatcttcaaaggaacaatttt 673
Query: 61 gaaatatcctgaatcaaaaccactaagctttgggagtctctgaaagttacagaaatctca 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaaatatcctgagtcaaaaccactaagctttgggagtctctgaaagttacagaaatctca 613
Query: 121 agcagagtttctttctatgggctctggattctgtaagacccaaacgaaagttgtcttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 612 agcagagtttctttctatgggctctggattctgtaagacccaaacgaaagttgtcttgcc 553
Query: 181 caaatttacgagtctctaattaaaactggattgtaaaggctgactccctattgatgattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 caaatttacgagtctctaattaaaactggattgtaaaggctgactccctattgatgattt 493
Query: 241 gcgttccatttgaatatcttcatctataaatctctgtgacgggttaggagcctttcctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gcgttccatttgaatatcttcatctataaatctctgtgacgggttaggagcctttcctaa 433
Query: 301 ataattccctatgcagacgtgcatattaaaaatagcttgtcaaatcgactaagaggaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ataattccctatgcagacgtgcatattaaaaatagcttgtcaaatcgactaagaggaaca 373
Query: 361 ctccgagttgccccgtccgtctccctacacagagacattttgacacagtgtatctgagtg 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 372 ctccgagttgccccgtccgtctccctacacagacacattttgacacagtgtatctgagtg 313
Query: 421 ctaataatgacattagaagatgttggagggagatctaattcagcatgcagaagtgacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctaataatgacattagaagatgttggagggagatctaattcagcatgcagaagtgacttt 253
Query: 481 gctgtcatctcctattttctgcacaattgacagcagatacttggggctgaat 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gctgtcatctcctattttctgcacaattgacagcagatacttggggctgaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
