Query= MSMg01no372_e23.b1 MSMg01no372_e23.b1 CHROMAT_FILE:
MSMg01no372_e23.b1 PHD_FILE: MSMg01no372_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:01 2005
(493 letters)
>mm_chr3_35903786_35904678
Length = 893
Score = 675 bits (349), Expect = 0.0
Identities = 355/357 (99%)
Strand = Plus / Minus
Query: 137 caaacaaaggcagagagattcttcattctcctcaaagaaaaaggaaatctaccaaccgta 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 caaacaaaggcagagagattcttcattctcctcaaagaaaaaggaaatctaccaaccgta 834
Query: 197 cactacaataataaacacgtgtacatcaaatacagggtcaccccatttcataaaagaaga 256
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 833 cactacaataataaacacgtgtacatcaaatacagggccaccccatttcataaaagaaga 774
Query: 257 actggtagatctaaaaccacagattgatccaaacacagtaaaagtgggcgatttcaataa 316
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 773 actggtagatctaaaaccacagattgatccaaacacagtaaaagtgggtgatttcaataa 714
Query: 317 cccatattcaccaattgacaatgttttgaataagaaatgttcccccatacttgaccattt 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cccatattcaccaattgacaatgttttgaataagaaatgttcccccatacttgaccattt 654
Query: 377 gtttcccagttagtggcactgttttcggggaggtttggttggggtatttgtgtgcaggac 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gtttcccagttagtggcactgttttcggggaggtttggttggggtatttgtgtgcaggac 594
Query: 437 tttatcaggcacactcttgtttgttgtatgtctactcacttgtctcagtttgccttg 493
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tttatcaggcacactcttgtttgttgtatgtctactcacttgtctcagtttgccttg 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_e23.g1 MSMg01no372_e23.g1 CHROMAT_FILE:
MSMg01no372_e23.g1 PHD_FILE: MSMg01no372_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:01 2005
(413 letters)
>mm_chr3_35726898_35727705
Length = 808
Score = 745 bits (385), Expect = 0.0
Identities = 404/413 (97%), Gaps = 5/413 (1%)
Strand = Plus / Plus
Query: 1 tatataaacttgttttgacttcattaattataacattttcttaaatcttaagatttagct 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatataaacttgttttgacttccttaattataacattttcttaaatcttaagatttagct 260
Query: 61 aatcagactaaatatatgtcttttctttttatcaaatagagtattttctttcttgagaat 120
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 261 aatcagactaaatatatgtctttt-----tatcaaatagagtattttctttctggagaat 315
Query: 121 tttgtctgacaactcaatgagtatatttatttaaataagttgttagtcttataaaacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tttgtctgacaactcaatgagtatatttatttaaataagttgttagtcttataaaacttt 375
Query: 181 tagaatacattttaaaaagttcttctcttcctaaaatccaagctgtaaactactttctga 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tagaatacatttaaaaaagttcttctcttcctaaaatccaagctgtaaactactttctga 435
Query: 241 aagacattcttaaacccttaatctccatacccctctgaaagtgaaccttattgcatctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aagacattcttaaacccttaatctccatacccctctgaaagtgaaccttattgcatctag 495
Query: 301 catggagttaaatgtcttctttaccaccacactactacagacgatttcagattgagggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 catggagttaaatgtcttctttaccaccacactactacagacgatttcagattgagggca 555
Query: 361 ttgcacaaatacaggaaaattgaaatttaatcataaaaaatgaataaagaatt 413
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 556 ttgcacaaatacaggaaaattgaaatttaatcataaagaatgaataaagaatt 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 808
Length adjustment: 9
Effective length of query: 404
Effective length of database: 799
Effective search space: 322796
Effective search space used: 322796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
