Query= MSMg01no372_f07.b1 MSMg01no372_f07.b1 CHROMAT_FILE:
MSMg01no372_f07.b1 PHD_FILE: MSMg01no372_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:03 2005
(483 letters)
>mm_chr3_18499940_18500822
Length = 883
Score = 830 bits (429), Expect = 0.0
Identities = 438/441 (99%)
Strand = Plus / Plus
Query: 5 gaattcttgttggcgagatactagctcaggatatacagtattaacatatttttggcatta 64
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgttggcgagatactagctcgggatatacagtattaacatatttttggcatta 264
Query: 65 agacgggtccttgtgtttattagctactatggggtaaataccagttccttcaatacttgt 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agacaggtccttgtgtttattagctactatggggtaaataccagttccttcaatacttgt 324
Query: 125 atttatagtgtccatagcatccttaacaaggatttcaaaatctatgatagtggccatttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttatagtgtccatagcatccttaacaaggatttcaaaatctatgatagtggccatttg 384
Query: 185 agtctcttttatctaaagagccattagccacaaggactaacaactgttttactgagagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtctcttttatctaaagagccattagccacaaggactaacaactgttttactgagagaa 444
Query: 245 gtactttaaaggggatggagaaatgcttcaatgctttaatgcactttttgcttttacaaa 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 gtactttaaaggggatggagaaatgcttaaatgctttaatgcactttttgcttttacaaa 504
Query: 305 ggacctgaacttaatacataacacacagtagcttataacaatctccaactccacttccag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggacctgaacttaatacataacacacagtagcttataacaatctccaactccacttccag 564
Query: 365 tgaatctagtgcctcgtctgacctctttgggtaccaggcacacatgtagggcacgtatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaatctagtgcctcgtctgacctctttgggtaccaggcacacatgtagggcacgtatat 624
Query: 425 atactcagaaaaactattcat 445
|||||||||||||||||||||
Sbjct: 625 atactcagaaaaactattcat 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_f07.g1 MSMg01no372_f07.g1 CHROMAT_FILE:
MSMg01no372_f07.g1 PHD_FILE: MSMg01no372_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:03 2005
(416 letters)
>mm_chr3_18526553_18527367
Length = 815
Score = 789 bits (408), Expect = 0.0
Identities = 414/416 (99%), Gaps = 1/416 (0%)
Strand = Plus / Minus
Query: 1 catgccaattcaacctaagccagcagtgattgggtgactgtccccagaatcactcatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 catgccaattcaacctaagccagcagtgattgggtgactgtccccagaatcactcatatt 556
Query: 61 tagtgtctgagcaaagctattgggtactggtaattgtaggctgttgggttgatggcagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tagtgtctgagcaaagctattgggtactggtaattgtaggctgttgggttgatggcagtt 496
Query: 121 attcttaatgaatgacccaaatcggcaagacttcaaggtcatgggtcactggaatctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 attcttaatgaatgacccaaatcggcaagacttcaaggtcatgggtcactggaatctgtt 436
Query: 181 gcctggtttctgtggacagctgctcacttggggaggggaggggatatccctcacactgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcctggtttctgtggacagctgctcacttggggaggggaggggatatccctcacactgac 376
Query: 241 agggtgtgtgtgcaagggagagagagaaagaaatagagacccatgagagcaagggcagga 300
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 375 agggtgtgtgtgcaagggagagaga-aaagaaatagagacctatgagagcaagggcagga 317
Query: 301 gctttttgcttatgagtgagctgcggaccaagacatgtcctatatccttatatcttcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gctttttgcttatgagtgagctgcggaccaagacatgtcctatatccttatatcttcatg 257
Query: 361 gaggggttgtatgtaaaggaaagaaatagttttttaactgtatattctttaacttg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaggggttgtatgtaaaggaaagaaatagttttttaactgtatattctttaacttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 815
Length adjustment: 9
Effective length of query: 407
Effective length of database: 806
Effective search space: 328042
Effective search space used: 328042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
