TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGATCCGCGGAA
TTCTCATTTGCCAAAACCAAATGGCAGAGAAGCACCTGAAAAAATGTTCA
ACATCCTTAATCATCAAGCAAATGCAAATCAAAACAACCCTGAGATTCCA
CCTCACACCAGTTAGAATGGCTAAGATCAAAAATCAGGTAACAGCAGATG
CTGGCGAGGATGTGGAGAAAGAACACTCCTCCATTGTTGGTGGGATTGCA
AGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGATAATTG
GACATAGTACTATTTTTAGGATCCCACAATACATCTCCTGGGCATATATC
CAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCACTATGTTCATA
GCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAATCCAGATGCCCCTC
AACAGAGGAATGGATACAGAAAATGTGGAACATTTACACAATGGAGTACT
ACTCAGCTATTAAAAAGAATGAATTAATGGAATTCCTAGGCAAATGGATG
GACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCTCAAAGGAACTC
ATACTATATGTACTCATTGATAAGTGGATATTAGCCCCGAATCTTATGAT
ACCCCAGATATACAATACCATTTGCTAAAGGCATGAAACTCCAGAAGAAC
GAATTACTCAGTGTGGACACTTTG

ATGATGGTNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGAATGAAATTGTGAGTAGTTTTAAAGC
ACATAACATTCCTAACAGTTTATTTAAAAAAGAGTTGTAATTTTTTTTAC
ATTTAAAAATTTTGAGTTTTATTTATGTGCTTAACAATAATATATATTCT
ATCTATAATTTATTTAAGAAATACCAACAGGAATTTGCCACATTCTTCTT
TTTATGAATTATTGAGCTGAGCCAATTTGTCTTGAACTTTGGCTTTCATT
TTTAAGTTCTACTTTTTTTGTACTGGAGTCCAGATCTCCATGAAGAGGAA
GTGGAGGGGACACGCCTTCACTTGCTTCGCTGCAAGCTTTCAGCACCAAT
TACTTTCTACACAATGGTGTCAACTTTCCATGCACCTACTTGCAAATGTG
CAGACTGGCAGGGCCATGGTCATTTAGTCTGGACATAGTGACTTCAGGCT
CCTTACTCCAAAGATGACTAAAGCCTGTGCCAACTATCCCAATGATGTGT
GAAAACTACTCCCCAAACTCTGACCATTAAAAAGGCTAAAAGGGAATATC
ATTTTGAAAGCCTATTATGTGAAACTTCCCCAAGACAAGAAAGTATGAAT
CTTGAATCTAGTCATAAACCCACATTTGTGGCCATTCTTTTAAATAAGAT
ATTTGTTTTAACTTTATCGAAGTTATGAAACAAAN

Query= MSMg01no372_i14.g1 MSMg01no372_i14.g1 CHROMAT_FILE:
MSMg01no372_i14.g1 PHD_FILE: MSMg01no372_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:18 2005
         (549 letters)



>mm_chr3_61197163_61198112
          Length = 950

 Score =  986 bits (510), Expect = 0.0
 Identities = 540/554 (97%), Gaps = 9/554 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaatgaaattgtgagtagttttaaagcacataacattcctaacagtttatttaaaaaag 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 agaatgaaattgtgagtagttttaaagcacataacattcctaatagtttatttaaaaaag 260

                                                                       
Query: 61  agttgtaatttttttt-acatttaaaaattttgagttttatttatgtgcttaacaataat 119
           ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttgtagtttttttttacatttaaaaattttgagttttatttatgtgcttaacaataat 320

                                                                       
Query: 120 atatattctatctataatttatttaagaaataccaacaggaatttgccacattcttcttt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatattctatctataatttatttaagaaataccaacaggaatttgccacattcttcttt 380

                                                                       
Query: 180 ttatgaattattgagctgagccaatttgtcttgaactttggctttcatttttaagttcta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatgaattattgagctgagccaatttgtcttgaactttggctttcatttttaagttcta 440

                                                                       
Query: 240 ct----ttttttgtactggagtccagatctccatgaagaggaagtggaggggacacgcct 295
           ||    ||    ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaaactt----gtactggagtccagatctccatgaagaggaagtggaggggacacgcct 496

                                                                       
Query: 296 tcacttgcttcgctgcaagctttcagcaccaattactttctacacaatggtgtcaacttt 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcacttgcttcgctgcaagctttcagcaccaattactttctacacaatggtgtcaacttt 556

                                                                       
Query: 356 ccatgcacctacttgcaaatgtgcagactggcagggccatggtcatttagtctggacata 415
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 557 ccatgcacctacttgcaaatgtgcagaccggcagggccatggtcatttagtctggacata 616

                                                                       
Query: 416 gtgacttcaggctccttactccaaagatgactaaagcctgtgccaactatcccaatgatg 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtgacttcaggctccttactccaaagatgactaaagcctgtgccaactatcccaatgatg 676

                                                                       
Query: 476 tgtgaaaactactccccaaactctgaccattaaaaaggctaaaagggaatatcattttga 535
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgtgaaaactgctccccaaactctgaccattaaaaaggctaaaagggaatatcattttga 736

                         
Query: 536 aagcctattatgtg 549
           ||| ||||||||||
Sbjct: 737 aagtctattatgtg 750


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space:   506660
Effective search space used:   506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)