Query= MSMg01no372_p09.b1 MSMg01no372_p09.b1 CHROMAT_FILE:
MSMg01no372_p09.b1 PHD_FILE: MSMg01no372_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:49 2005
(404 letters)
>mm_chr3_98116226_98117029
Length = 804
Score = 766 bits (396), Expect = 0.0
Identities = 402/404 (99%)
Strand = Plus / Plus
Query: 1 aaagccttgaggatgtagccttagtaaataaaaggctgtcttcagtctctctctgggtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagccttgaggatgtagccttagtaaataaaaggctgtcttcagtctctctctgggtat 260
Query: 61 tacaattaagctgaagttgaagaataaagagtactgagaatcgtcagggaacagagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaattaagctgaagttgaagaataaagagtactgagaatcgtcagggaacagagagag 320
Query: 121 tacctgaaccagcagcttgcatctaatactgactcggagtcattattgaatcagcaccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacctgaaccagcagcttgcatctaatactgactcggagtcattattgaatcagcaccgt 380
Query: 181 ccccattcccagctttctcaggactctcctcatgctgaggctggacctcggcaggtgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ccccattcccagctttctcaggactctcctcatgctgaggctggacctcagcaggtgcag 440
Query: 241 gaggtagccactttgaattcttcaaaagcaagccattattcagttataaaactagctcta 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 gaggtagccactttgaattcttcaaaagcaagtcattattcagttataaaactagctcta 500
Query: 301 gatcaagtgcagctaactggagggcattccttagaatgagtgatacctcaggtttgagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatcaagtgcagctaactggagggcattccttagaatgagtgatacctcaggtttgagat 560
Query: 361 cttccaatgggggagggggtggtggtcgtgaattctgccttttc 404
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttccaatgggggagggggtggtggtcgtgaattctgccttttc 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_p09.g1 MSMg01no372_p09.g1 CHROMAT_FILE:
MSMg01no372_p09.g1 PHD_FILE: MSMg01no372_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:49 2005
(523 letters)
>mm_chr3_98439455_98440377
Length = 923
Score = 716 bits (370), Expect = 0.0
Identities = 383/388 (98%), Gaps = 2/388 (0%)
Strand = Plus / Minus
Query: 1 tctagcctgaatctggaatcaaagaatctctagcctgtacacatcatggtgaaccatgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 386 tctagcctgaatctggaatcaaagaatctctagcctgtacacatcatggtgaaccacgaa 327
Query: 61 tcagagagcaaaggtagaaccagggctgaactgttgccttcaaagacaccctactagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcagagagcaaaggtagaaccagggctgaactgttgccttcaaagacaccctactagagc 267
Query: 121 ttcccagtgtcattcccggctttcaggtttgtggcactctaagaatcagggtccaaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttcccagtgtcattcccggctttcaggtttgtggcactctaagaatcagggtccaaaata 207
Query: 181 aattgtggggctgcaaagatgactaagtggttaagagtacttggtagtcttatagcagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattgtggggctgcaaagatgactaagtggttaagagtacttggtagtcttatagcagac 147
Query: 241 caatgtcctgtcaccagcacacagatggcaaatcataaatgtggggtggggaatcaagct 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 146 caatgtcctgtcaccagcacacagatggcaaatcacaaatgtggggtggggaatcaagct 87
Query: 301 cttatgttaaaagaaatatgagagagtagaatctggagccaattgtacttaccatgactg 360
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 86 cttatgttaaaagaaatat--gagagtagaatctggagccaattgtacttgccatgactg 29
Query: 361 gaaacataaatgtagatagctccaaatg 388
||||||||||||||||||||||||||||
Sbjct: 28 gaaacataaatgtagatagctccaaatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
