XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTAT
TTGTACCTTCTTTTCTTTTTACATTTTAAAAATTATTTTATTTACATTTC
AATCATTGCCTCCCTCCTTTTTGCCCCCACCCTCACAGTTCCTCATCCTA
TTCCTCCTTTCCCTTGCCTCCAGGAGGGTGTTCCCTACCCCACCAGGCCT
CCCCCTTCCCTGGGGACTAAAGTTTATCCAGGATTAAGTGCATCTTCTTC
CACTGAGGCCAGACCAAGCAGACTTCTACTCTATATGTACCAGGGGCCTC
AGACTGACCTGTGTATGCTCCTGGTTGGTGGCTCAGTCTCTGGGAGCTCT
CTGGGGTCTGGATTAGTTGAGACTTCTGGTCTTCCCATGGAGTCACTCTC
TCCTACAGTTTTTTCAGTCATTCCCCTAATTCAACTATAAGGATTACTGA
CTTCAGTTCAATGGTTGAGTGTTAAGTATCTGCTTCCGTCTTAGTCAGCT
TCTGGTGGGGCCTTTCAGAGGACAGGCATATCCAGTTATGTGGAGCAGAA
GAGAATCCCAGAGGACCAAGAGAATGAATGGAAATAAGCAGCCTTGGTGG
TGGGACATAAAGAGACCCTCTAGAAAGTATCCTTTCGAGAGGCTCGGGAA
GTGAGAAACTCTAAGGACTCAATGGGGGTGACCTTATCAAAAATGCCCAA
CAGTGTGGAGAGGGAACTTGAAGATCCCACC

GATAAGGAGGATGAGGAGAGATGAGGATGGGGAGAGAGAGAGTAGAGGTG
GGNGTGGGNNGNGNGTGTCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAAAG
GTTAGCTTATCCTAAGAGGTCAGCCATAAACACATACGAACAATACAGAA
TGATCTTAGCCAGTTGTGTTTGAAAGAATAAAAGACCATGCATTTGAGAG
GGAATATGAGGGAAATTAGAGATGGATAAAGGAGAGTGAATGGTGGATGG
TGTAAGTACAACACCCTATATGAAATTCTCAAAAAGAAATAAAAAGGACA
AAATGGAAAACTGAGAGTTACACACTTTAAGACACAGCAGACTTTATGAA
AAAGAAAAATTAATAAGGACATTTGCAACTAAGAGGACACCTATTTACAA
ACCTGTCTATACACAGCAAAGCATTCTACACATAAGACCAAAGTTTGCAG
AAAATTTCCAGAAGAAAAAGAGCCAGCATCACTATATTTGAGGACTTACA
TACTCTTCTTATGGTATAGGCTACATACTCTTGACCAAAATGCAAAAAGA
ATATACACCCTGGTATACCATTCTGTAAGTGAACTGAATTTACTTATTTG
TTACTAGCTAAATCTTCCCATACAAAAAACCCAGATGCAATGTTGTTTTC
GGAGTATATACGGGCCTTCCATAACGTGAAGAACTCATCCTTTAANTATA
TTACACCGCCCTTTTGCACATACTAATAATTCCCTCCCCCTCTCTTCACG
ACCCTTAATATTCACTCTGTAGTCTCAAT

Query= MSMg01no373_a04.g1 MSMg01no373_a04.g1 CHROMAT_FILE:
MSMg01no373_a04.g1 PHD_FILE: MSMg01no373_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:53 2005
         (424 letters)



>mm_chr3_128429725_128430549
          Length = 825

 Score =  766 bits (396), Expect = 0.0
 Identities = 417/424 (98%), Gaps = 1/424 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttaaaggttagcttatcctaagaggtcagccataaacacatacgaacaatacagaatga 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 624 tttaaaggttagcttatcctaagaggtcagccataaacacatatgaacaatacagaatga 565

                                                                       
Query: 61  tcttagccagttgtgtttgaaagaataaaagaccatgcatttgagagggaatatgaggga 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 564 tcttagccagttgtgtttgaaagaataaaggaccatgcatttgagagggaatatgagggg 505

                                                                       
Query: 121 aattagagatggataaaggagagtgaatggtggatggtgtaagtacaacaccctatatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aattagagatggataaaggagagtgaatggtggatggtgtaagtacaacaccctatatga 445

                                                                       
Query: 181 aattctcaaaaagaaataaaaaggacaaaatggaaaactgagagttacacactttaagac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aattctcaaaaagaaataaaaaggacaaaatggaaaactgagagttacacactttaagac 385

                                                                       
Query: 241 acagcagactttatgaaaaagaaaaattaataaggacatttgcaactaagaggacaccta 300
           ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 384 acagcagactttaggaaaaagaaaaattaagaaggacatttgcaactaagaggacaccta 325

                                                                       
Query: 301 tttacaaacctgtctatacacagcaaagcattctacacataagaccaaagtttgcagaaa 360
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttacaaacctgtctatacacaacaaagcattctacacataagaccaaagtttgcagaaa 265

                                                                       
Query: 361 atttccagaagaaaaagagcca-gcatcactatatttgaggacttacatactcttcttat 419
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 264 atttccagaagaaaaagagccaggcatcactatatttgaggacttacatactcttcttat 205

               
Query: 420 ggta 423
           ||||
Sbjct: 204 ggta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space:   338640
Effective search space used:   338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)