Query= MSMg01no375_h12.b1 MSMg01no375_h12.b1 CHROMAT_FILE:
MSMg01no375_h12.b1 PHD_FILE: MSMg01no375_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:04 2005
(455 letters)
>mm_chr3_131432399_131433253
Length = 855
Score = 824 bits (426), Expect = 0.0
Identities = 444/450 (98%)
Strand = Plus / Minus
Query: 6 ggaattcaccaatgtatctaggtgccaggaggcaagagagcaactgctgaagccagctgc 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ggaattcaccaatgcatctaggtgccaggaggcaagagagcaactgctgaagccagctgc 596
Query: 66 aatgtggatttgtagatcctggctttcttttaatcttaaaatagctcgagcatccctgtt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aatgtggatttgtagatcctggctttcttttaatcttaaaatagctcgagcatccctgtt 536
Query: 126 gttggtcatttttcagatggagtcttctgtacttatctatttcatatacgttacttatcc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gttggtcatttttcagatggagtcttctgtacttatctatttcatatacgttacttatcc 476
Query: 186 tgaagctttcacagtgtgtgaaagagtcatcataaaccactttatttgtgatataccaga 245
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 475 tgaagctttcacagtgtgtgaaagagtcatcataaaccactttatctgtgatataccaga 416
Query: 246 tgccatgggcaggagacggtgaagtcgcatcatggtaaaatgtattcttaggagacttct 305
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 415 tgccatgggcaggagacggtgaagtcgcatcaagggaaaatgtattcttaggagacttct 356
Query: 306 agaacagctctccattcctctgaaaactccaaactgtgctctgtgtcctgtcacccctga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agaacagctctccattcctctgaaaactccaaactgtgctctgtgtcctgtcacccctga 296
Query: 366 gcacttctgcttcagtaaggattagatggagatctcacaatgggtagtttccagaaccat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gcacttctgcttcagtaaggattagatggagatctcacaatgggtagtttccagaaccat 236
Query: 426 tccaaacaaggactggagaggtgactcagc 455
|||||||||| ||| |||||||||||||||
Sbjct: 235 tccaaacaagaactagagaggtgactcagc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_h12.g1 MSMg01no375_h12.g1 CHROMAT_FILE:
MSMg01no375_h12.g1 PHD_FILE: MSMg01no375_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:04 2005
(341 letters)
>mm_chr3_131244046_131244784
Length = 739
Score = 611 bits (316), Expect = e-179
Identities = 334/344 (97%), Gaps = 8/344 (2%)
Strand = Plus / Plus
Query: 1 aagggactccagggctcccttggttgtagtcaaggtcctttggctgcagtgaccttgtta 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 aagggactccagggctcccttggttgtagtcaaggtcctttggctgtagtgaccttgtta 260
Query: 61 ggcgtccttgttaggtgggagctcagctgattgactggaacaagctggtgatctctgtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcgtccttgttaggtgggagctcagctgattgactggaacaagctggtgatctctgtag 320
Query: 121 cagactggtctcactgtgttctctagctggcatctgcaagttcatccaacacagacaagt 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaccggtctcactgtgttctctagctggcatctgcaagttcatccaacacagacaagt 380
Query: 181 cacagatgcacgtctagcttagccttggaaagccgtaatatatatagttcacagtgtata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacagatgcacgtctagcttagccttggaaagccgtaatatatatagttcacagtgtata 440
Query: 241 tatatatttttt---tacagtgagcccctcagccagcccagacttaagagggtgccctga 297
||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatat-----ttggctacagtgagcccctcagccagcccagacttaagagggtgccctga 495
Query: 298 gatagtttgtgttgaggggacagtggcagggcacactgtagagg 341
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gatagtttgtgttgaggggacagtggcagggcacactgtagagg 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 739
Length adjustment: 9
Effective length of query: 332
Effective length of database: 730
Effective search space: 242360
Effective search space used: 242360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
