Query= MSMg01no375_p15.b1 MSMg01no375_p15.b1 CHROMAT_FILE:
MSMg01no375_p15.b1 PHD_FILE: MSMg01no375_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:45 2005
(544 letters)
>mm_chr3_64147691_64148634
Length = 944
Score = 1044 bits (540), Expect = 0.0
Identities = 540/540 (100%)
Strand = Plus / Plus
Query: 5 gaattctgagacagctaactggaattggaaaccatctaggggacaaactagtaacccagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgagacagctaactggaattggaaaccatctaggggacaaactagtaacccagt 264
Query: 65 gtaatggaaactcccaggaatataagagaatgattttagctaaggctcctagcagtggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaatggaaactcccaggaatataagagaatgattttagctaaggctcctagcagtggag 324
Query: 125 gatgtgaagccttaaatggctatttcctttaaccaagcaattgaagggattaggtaccaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatgtgaagccttaaatggctatttcctttaaccaagcaattgaagggattaggtaccaa 384
Query: 185 cacagccacataatatttcaactacaaaatttgtcctgccttcaagatgtgctgggttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacagccacataatatttcaactacaaaatttgtcctgccttcaagatgtgctgggttaa 444
Query: 245 aagttacacagaaattatgggagtggccatatatattaaaattttagtaaaatattttag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagttacacagaaattatgggagtggccatatatattaaaattttagtaaaatattttag 504
Query: 305 taaagcatggattctttaaattataactagaacaaagaacaacatgaaaaacatgctaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaagcatggattctttaaattataactagaacaaagaacaacatgaaaaacatgctaca 564
Query: 365 ctaaggaaattcacttggaatatggcaaaaatgttaggtgttttgcatttatttagtgcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctaaggaaattcacttggaatatggcaaaaatgttaggtgttttgcatttatttagtgcc 624
Query: 425 tgaaaaaatagagttttctgtctacatataaacaaaatatgtcagaccaactaacccttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgaaaaaatagagttttctgtctacatataaacaaaatatgtcagaccaactaacccttg 684
Query: 485 aagattcagtgttccaaaacaacgatgagttctttggaagaacaagttcatattttgtag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagattcagtgttccaaaacaacgatgagttctttggaagaacaagttcatattttgtag 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_p15.g1 MSMg01no375_p15.g1 CHROMAT_FILE:
MSMg01no375_p15.g1 PHD_FILE: MSMg01no375_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:45 2005
(397 letters)
>mm_chr3_64320118_64320914
Length = 797
Score = 754 bits (390), Expect = 0.0
Identities = 394/396 (99%), Gaps = 2/396 (0%)
Strand = Plus / Minus
Query: 1 ttacaatacccaagcctttctgtgtgcagatgtttcattacttaacttcttttgttgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttacaatacccaagcctttctgtgtgcagatgtttcattacttaacttcttttgttgcca 350
Query: 61 tttctaacttattgctataaaaatcatatatccttagggtcactagacattctattaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tttctaacttattgctataaaaatcatatatccttagggtcactagacattctattaaaa 290
Query: 121 atagtcttaaagtatttccacatatactttactgttgtggcaataagctacatattattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atagtcttaaagtatttccacatatactttactgttgtggcaataagctacatattattt 230
Query: 181 tcataatatcttttaaggaaaaggtaagtcacctttatttccaacactcagaaagcagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tcataatatcttttaaggaaaaggtaagtcacctttatttccaacactcagaaagcagaa 170
Query: 241 gtgggaggatattggtgagtttgtatactgtaacccgaaattacaaagagggagagagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gtgggaggatattggtgagtttgtatactgtaacccgaaattacaaagagggagagagag 110
Query: 301 agacagagtgagacagacagacacacgcacacacacacatgagagagagagagagagaga 360
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 109 agacagagtgagacagacagacacacgcacacacacacat--gagagagagagagagaga 52
Query: 361 gaaggagagagagaggagagagaggagagagagaga 396
||||||||||||||||||||||||||||||||||||
Sbjct: 51 gaaggagagagagaggagagagaggagagagagaga 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
