Query= MSMg01no376_e10.b1 MSMg01no376_e10.b1 CHROMAT_FILE:
MSMg01no376_e10.b1 PHD_FILE: MSMg01no376_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:08 2005
(463 letters)
>mm_chr3_52207993_52208855
Length = 863
Score = 820 bits (424), Expect = 0.0
Identities = 451/462 (97%), Gaps = 5/462 (1%)
Strand = Plus / Minus
Query: 5 gaattccttctg---ttctgccctggctttctttttttctcagccccttgtgagaacaca 61
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gaattccttctgaaat--tgccctggctttctttttttctcagccccttgtgagaacaca 622
Query: 62 ggaaaccctgcttccccaatcctgaaatatctgcctcaggaaggaaaggacattgtcttt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaaaccctgcttccccaatcctgaaatatctgcctcaggaaggaaaggacattgtcttt 562
Query: 122 ccagggccgctcgcttgtgaactggccccatggccttctttgtaaatacaagacagaagc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccagggccgctcgcttgtgaactggccccatggccttctttgtaaatacaagacagaagc 502
Query: 182 aaaccaatttggacattccttgcaaacagcaagtttgaaatataataagcaagtcgacgt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 aaaccaatttggacattccttgcaaacagcaagtttgaaatataataagcaagtcaacgt 442
Query: 242 aagggcagggcaaggggacacgaagccaatactttatgtatagactgtaggctacaagca 301
|||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 441 aagggcagggcaaggggacacgaaaccaatacaaaatgtagagactgtaggctacaagca 382
Query: 302 gcagaggtgttttgttcttatttggtttactggttggagcagggtgcttattcaaggcag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagaggtgttttgttcttatttggtttactggttggagcagggtgcttattcaaggcag 322
Query: 362 taatcattcaaaattcttttcctattccagaaatcatttatcaatttacctttgacaaga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatcattcaaaattcttttcctattccagaaatcatttatcaatttacctttgacaaga 262
Query: 422 tcaacataaaattgatttctatgctttatagaaagcagtcaa 463
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaacataaaattgatttctatgctttatagaaagcagtcaa 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_e10.g1 MSMg01no376_e10.g1 CHROMAT_FILE:
MSMg01no376_e10.g1 PHD_FILE: MSMg01no376_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:08 2005
(260 letters)
>mm_chr3_52085695_52086354
Length = 660
Score = 484 bits (250), Expect = e-141
Identities = 256/258 (99%)
Strand = Plus / Plus
Query: 1 tcatgagaagtgctcatatgtgcaggaagcccaacttggccacccatggaaactttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatgagaagtgctcatatgtgcaggaagcccaacttggccacccatggaaactttgaga 260
Query: 61 ttgccccttttctcatagtgatttagtttcaactgctttagatctctggggatcaagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgccccttttctcatagtgatttagtttcaactgctttagatctctggggatcaagact 320
Query: 121 ctctgccctgatgagatatttgtcttaattacagtgtgtcattctgtgcggcgtaagacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctgccctgatgagatatttgtcttaattacagtgtgtcattctgtgcggcgtaagacc 380
Query: 181 tgagtctaatgacgtgtccaggaccttaacagcacaactcatctaagtgaagctgtgggg 240
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagtctaatgacatgtgcaggaccttaacagcacaactcatctaagtgaagctgtgggg 440
Query: 241 aggagagggaaggggagg 258
||||||||||||||||||
Sbjct: 441 aggagagggaaggggagg 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 660
Length adjustment: 9
Effective length of query: 251
Effective length of database: 651
Effective search space: 163401
Effective search space used: 163401
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
