Query= MSMg01no377_f21.b1 MSMg01no377_f21.b1 CHROMAT_FILE:
MSMg01no377_f21.b1 PHD_FILE: MSMg01no377_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:31 2005
(368 letters)
>mm_chr3_54248954_54249714
Length = 761
Score = 574 bits (297), Expect = e-168
Identities = 345/367 (94%), Gaps = 15/367 (4%)
Strand = Plus / Plus
Query: 5 gaattcaaaggag----attctcacaaataggaccttcacaaactgagcaagaatacagt 60
||||||||||||| | ||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaggagaaaaa---tcacaaatagggccttcacaaactgagcaagaatacagt 261
Query: 61 ttaggagagaatgagcagacccgaccccagcccccaccccatgttactctctgtggttat 120
|||||||||||||| || || |||| ||||| ||| ||||||||||||||||||||
Sbjct: 262 ttaggagagaatgaaca-ac---accc---ccccc-ccctatgttactctctgtggttat 313
Query: 121 ttcttcagattaggatagccaaaggcaaggggcctgtgctgaaatgttaagatggcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttcttcagattaggatagccaaaggcaaggggcctgtgctgaaatgttaagatggcttgg 373
Query: 181 gatattggaatgtgaagagggattaaaagatttagacacagaacctagagagaagaatta 240
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 374 gatattggaatgtgaagagggattaaaggatttagtcacagaacctagagagaagaatta 433
Query: 241 agcaaatgcccaggagaagagagaatagttctgttctagtgttagaagctttctttcatg 300
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 434 agcaaatgcccaggagaagagagaatagttctgttcaagtgttagaagcttcctttcatg 493
Query: 301 gcagaaaagtcaggattatactacctgtgccaaaaggaaataagatcccaaggagagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gcagaaaagtcaggattatactacctgtgccaaaaggaaataagatcccaaggagagaat 553
Query: 361 gtaaaag 367
|||||||
Sbjct: 554 gtaaaag 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 761
Length adjustment: 9
Effective length of query: 359
Effective length of database: 752
Effective search space: 269968
Effective search space used: 269968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_f21.g1 MSMg01no377_f21.g1 CHROMAT_FILE:
MSMg01no377_f21.g1 PHD_FILE: MSMg01no377_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:31 2005
(377 letters)
>mm_chr3_54448726_54449502
Length = 777
Score = 609 bits (315), Expect = e-179
Identities = 315/315 (100%)
Strand = Plus / Minus
Query: 5 atttgggtgttgcaaagttgatttgcaccaagttctctgacatttgcaatcaagatcaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atttgggtgttgcaaagttgatttgcaccaagttctctgacatttgcaatcaagatcaac 256
Query: 65 cttgatacacacccttaccaactctttttcctcatctcattaaagaagagatttattttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cttgatacacacccttaccaactctttttcctcatctcattaaagaagagatttattttt 196
Query: 125 ttcaaacaaagatttatttatatattttatgtataggagtacactgtagttgtgagcctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttcaaacaaagatttatttatatattttatgtataggagtacactgtagttgtgagcctt 136
Query: 185 catgtggttgatgggaattgaatttaggacctctgctcgctgtactcaacccagtcaacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 catgtggttgatgggaattgaatttaggacctctgctcgctgtactcaacccagtcaacc 76
Query: 245 ccactcgctctggtagatcccgcttgctcagtccctgctggctcaggcccaaagatttat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ccactcgctctggtagatcccgcttgctcagtccctgctggctcaggcccaaagatttat 16
Query: 305 ttattattataaata 319
|||||||||||||||
Sbjct: 15 ttattattataaata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
