XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
ATTTCTACGGATCTACCTCTCTTTTGTGTATATGAGGGGTTTGTTTTCTT
GCAGTTTTGTGCACCATGCGTGTGCCTGGTGCTTGCAGAGATTGGAAGAG
GTCACCAGATCCTCTGGAATTAGAGTTAAGATAATTGTGAACCACCATAA
ATGTGGGTGCTGGAAACCGAACCTGGGTTTTTTGAAAGAGCAGAAAGTGC
TCATAACTGCTCACTCGTCTCTCCTACCCTGACTAAAAACTGCTATAAGG
AAAACCTAGACGTATGTGGGGAGCACTTCCTGCACACTTCCATCTTCTTG
ACACTTATGAAGAACTTGAAGCTTGTTAGGGTGTCTTAGAACTCAAAACG
ATGTCCCCTGTAGACCTAAAAATGACCTAACTTTCCTGAAATAGTCTGCC
AGTGAAAAGCCTTGTGTCTTGGACAAAACATTGGCGGTGTACAGGGCACC
ACTGAATGCTGGGCCAGATGTGGAAAGGACCTGCTCTAGCTTACACGGTC
TGGCAAAGACTGTTGTGTGAGCCCAGTCTTAATGCTTGGTGACCACAATG
CCCCTGAGTTCCAAGAGAAGAGCCATGTTTTTATGGAAAGGACTGGTGGG
TAATCTATCGAGACGGGCCTTGTTTGAACAGTGGCATGGCTGTTTACTGG
TCCCACTATATTCTCTTGATATTTGGAGTCGCGTTCCCTCCTTTTATCTT
TATCAAAACCCTCCCGCCTTTG

GTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAGAACTTTTCAGCTGGGGAACGAGAGTACCAGT
GAGTGCAGCTTTACGAGGTAAGTCTGATCTTGAACTTTCTAAGGAAATTC
AAGACAGTCTATCAGAAGTAAAGTGGAATATGTTTGGCCTTGAATTTTTT
CTAGTGTTAGAAGCCCTTTTGTTCCTTTTCACATGTTATCAAGTGGTTAA
GGCAGGGCGAATTCTAGACGAAATTAAAGGCAATCTATCAGAAGTAAAGC
GGGGAGAGAGAGTAGGAGCAAAGAGAAAATATGGTACACAAAATAAGTAT
ACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGTTAGGTAG
GAATACCTGGAGAGAGATTAGAAGAAAAAGAGGAAAAAGGGAAAAGAAGA
AAGATCAATTAGCGGAGGTCTCTAGGAAAAGGAGCCTGTGCTCATCGCTG
GATGGGCTCGGGGAGCCAGCTCTTAGTAGCTCTGAAGCAGGTGAAGAATC
CTCCTCTGAGGAAACAGACTGGGAGGAAGAAGCAGCTCATTATGAGAAAA
AAGGGTACCAGTCAGGTAAAGTGCTAGCTAATTCAGTTAAGGAACCCAAA
AGTGGCTGGTGAAAGCCAGTTTTGCTGAATGTCCTCACGGCCATTCTGTT
TTATGGTCCCCCCTATTGGGAACCCCCCCCCCGTTGATTTTGCGCCCTTT
TTGCTCAACAGGCCATTCCCCTG

Query= MSMg01no379_f19.b1 MSMg01no379_f19.b1 CHROMAT_FILE:
MSMg01no379_f19.b1 PHD_FILE: MSMg01no379_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:07 2005
         (523 letters)



>mm_chr3_146266593_146267515
          Length = 923

 Score =  951 bits (492), Expect = 0.0
 Identities = 513/520 (98%), Gaps = 1/520 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttatttctac-ggatctacctctcttttgtgtatatgaggggtttgttttcttg 63
           ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttatttcaaaaggatctacctctcttttgtgtatatgaggggtttgttttcttg 263

                                                                       
Query: 64  cagttttgtgcaccatgcgtgtgcctggtgcttgcagagattggaagaggtcaccagatc 123
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagttttgtgcaccatgcatgtgcctggtgcttgcagagattggaagaggtcaccagatc 323

                                                                       
Query: 124 ctctggaattagagttaagataattgtgaaccaccataaatgtgggtgctggaaaccgaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctctggaattagagttaagataattgtgaaccaccataaatgtgggtgctggaaaccgaa 383

                                                                       
Query: 184 cctgggttttttgaaagagcagaaagtgctcataactgctcactcgtctctcctaccctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctgggttttttgaaagagcagaaagtgctcataactgctcactcgtctctcctaccctg 443

                                                                       
Query: 244 actaaaaactgctataaggaaaacctagacgtatgtggggagcacttcctgcacacttcc 303
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 actaaaaactgctataaggaaaacctagacgcatgtggggagcacttcctgcacacttcc 503

                                                                       
Query: 304 atcttcttgacacttatgaagaacttgaagcttgttagggtgtcttagaactcaaaacga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atcttcttgacacttatgaagaacttgaagcttgttagggtgtcttagaactcaaaacga 563

                                                                       
Query: 364 tgtcccctgtagacctaaaaatgacctaactttcctgaaatagtctgccagtgaaaagcc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtcccctgtagacctaaaaatgacctaactttcctgaaatagtctgccagtgaaaagcc 623

                                                                       
Query: 424 ttgtgtcttggacaaaacattggcggtgtacagggcaccactgaatgctgggccagatgt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgtgtcttggacaaaacattggcggtgtacagggcaccactgaatgctgggccagatgt 683

                                                   
Query: 484 ggaaaggacctgctctagcttacacggtctggcaaagact 523
           |||||||||||||||||||||||||  |||||||||||||
Sbjct: 684 ggaaaggacctgctctagcttacacaatctggcaaagact 723


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space:   468369
Effective search space used:   468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)