Query= MSMg01no379_h13.b1 MSMg01no379_h13.b1 CHROMAT_FILE:
MSMg01no379_h13.b1 PHD_FILE: MSMg01no379_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:15 2005
(409 letters)
>mm_chr3_96349028_96349836
Length = 809
Score = 656 bits (339), Expect = 0.0
Identities = 387/410 (94%), Gaps = 14/410 (3%)
Strand = Plus / Minus
Query: 1 aaaagctgtcaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 aaaagctgtcaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag 747
Query: 61 gaaggaaggaaggaaggaggaaagaaaacaaaaaagaaaagcagagttgccagtcttctt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gaaggaaggaagga---aggaaagaaaacaaaaaagaaaagcagagttgccagtcttctt 690
Query: 121 tgggtaactttttagtcattagtgccacctgctgacaatttgtaaaagtggaaagtcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tgggtaactttttagtcattagtgccacctgctgacaatttgtaaaagtggaaagtcaga 630
Query: 181 attactggtctcaggtgtgcgtgtgtgtctgtgtgtgtctgtgtgtgtttgtgtctgtgt 240
|||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 629 attactggtcacaggtgtgcgtgtgtgtctgtgtgtgt--------gtttgtgtctgtgt 578
Query: 241 gtgtacatgctctgnttt-gttttaaaaaactgtagacctttttattggatatgattttg 299
|||| ||||||| | ||| | |||||||||||||||||| ||||||||||||||||||||
Sbjct: 577 gtgtgcatgctcagtttttgctttaaaaaactgtagacccttttattggatatgattttg 518
Query: 300 acaatgacccactctggagaatgaaaatggatcttgtgataacagtaaagcagcaagcat 359
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 517 agaatgacccactctggagaatgaaaatggatcttgtgataacagtaaagtagcaagcat 458
Query: 360 acccaggcagtggtgatacatacctttaacccagcacttgggaggcaaag 409
|||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 457 acccaggcagtggtgacaca--cctttaacccagcacttgggaggcaaag 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_h13.g1 MSMg01no379_h13.g1 CHROMAT_FILE:
MSMg01no379_h13.g1 PHD_FILE: MSMg01no379_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:15 2005
(349 letters)
>mm_chr3_96188290_96189038
Length = 749
Score = 652 bits (337), Expect = 0.0
Identities = 346/349 (99%)
Strand = Plus / Plus
Query: 1 ttcattgcaccttgtttcttccatggctcaagggacccagaagggcagcgaaattcacct 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcattgcaccttgtttcttccatgtctcaagggacccagaagggcagcgaaattcacct 260
Query: 61 agaaaggagacagcaggagactggagagagatatggcttggctgttaagaatgttgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaggagacagcaggagactggagagagatatggcttggctgttaagaatgttgccag 320
Query: 121 agatggaggcaatggctaagcaataaccaacccaacttgagacccatcccatgggcatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatggaggcaatggctaagcaataaccaacccaacttgagacccatcccatgggcatgc 380
Query: 181 accaatctctgacactactaatgatactctgttatattcgcagtcagcctagcataactg 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaatctcagacactactaatgatactctgttatattcgcagtcagcctagcataactg 440
Query: 241 tcctctgagaggttccacacagcagcggactgaaacagatgcagagacccagagccagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctctgagaggttccacacagcagcggactgaaacagatgcagagacccagagccagac 500
Query: 301 attgggtggagctgggggagtcttatggaagagatggggggaggattga 349
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 attgggtggagctgggggagtcttgtggaagagatggggggaggattga 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
