CGCTATACGACTCACTATAGTTCAGAGGATCCGCGGAATTCATGTCTATG
ATTTCACCTTTAATTTTTTTCACATGTTGTTCAATGGATCCTGGGATCAA
CTTAAAGCATACTCTTATGTATAATGGGAGTGATTATCTTTATAGTTGTA
GAAGTCATTGCATCTATTCAGCGGAGACACTGACCCCTGGCGTCCTGCCT
TCCATACTTACATTTTTCTCTCCCATGTGTACTCTTTGTTTCTATCCCCC
TTGTCCTCTGTCTCCTGTGTCTTTTGCCTCTTTACCATCTAATGTCTGGT
GTCTGATATCAGCATAACTCAGGCCTGTTAGGATGCACTCCAGAAGACTT
AGATCCTCCTCAAGGTTTTTTGACATGCCTGAAATCATTTGTATTATTCT
GAAATATCTGGCCGAATTCAGCAGCAGCAGCAGCGTGTTTTGTTTTTTGT
TTTGTTTTTTTTCCTTTGATGAAATACATTATTACTACTATGTTCTTCGT
AATGGAATGTCCAGATTTTTGATTTCTTCATGTGTCATATGATTCAGATA
AATTGTGTGCAGTGTGTACATCCTGGAATTGGCTCACTTTTTCTTGGNTC
TCAAATTTGGGGCCTTCTAGCTCTTTTTTTTTTTTTTTTGAGACAGGGTT
TCCCTGTGTATCCCTGACTGGTCAGGAACTTACTCTGGATAATATAAAGA
CCTGGAACCCCAAAAACCTCCTGGCCCGGCCCCTGGAGAGGGGGAAATAA
AGAGTGTCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG
TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
GGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCCTCA
GAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC
ATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGAT
GCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATG
GAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTATGCAA
ATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAA
GGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACC
TAGGATACCCAAGATATAAGATACAATTTGCTAAACACATGAAACTCCAG
AAGAATGAAGACTGAACCAGTCATGGTGTTTAACTCTTAATGCATAGGGA

Query= MSMg01no382_a05.b1 MSMg01no382_a05.b1 CHROMAT_FILE:
MSMg01no382_a05.b1 PHD_FILE: MSMg01no382_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:37 2005
         (547 letters)



>mm_chr3_76226539_76227485
          Length = 947

 Score = 1015 bits (525), Expect = 0.0
 Identities = 537/541 (99%), Gaps = 1/541 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattcatgtctatgatttcacctttaatttttttcacatgttgttcaatggatcctggg 67
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatgtctatgaattcacctttaatttttttcacatgttgttcaatggatcctggg 267

                                                                       
Query: 68  atcaacttaaagcatactcttatgtataatgggagtgattatctttatagttgtagaagt 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atcaacttaaagcatactcttatgtataatgggagtgattatctttatagttgtagaagt 327

                                                                       
Query: 128 cattgcatctattcagcggagacactgacccctggcgtcctgccttccatacttacattt 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cattgcatctattcagcggagacactgacccctggcgtcctgccttccatacttacattt 387

                                                                       
Query: 188 ttctctcccatgtgtactctttgtttctatcccccttgtcctctgtctcctgtgtctttt 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttctctcccatgtgtactctttgtttctatcccccttgtcctctgtctcctgtgtctttt 447

                                                                       
Query: 248 gcctctttaccatctaatgtctggtgtctgatatcagcataactcaggcctgttaggatg 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gcctctttaccatctaatgtctggtgtctgatatcagcataactcaggcctgttaggatg 507

                                                                       
Query: 308 cactccagaagacttagatcctcctcaaggttttttgacatgcctgaaatcatttgtatt 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 cactccagaagacttagatcctcctcaaggttttttgacatgcctgaaatcatttgtatt 567

                                                                       
Query: 368 attctgaaatatctggccgaattcagcagcagcagcagcgtgttttgttttttgttttgt 427
           |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 568 attctgaaatatctggccgaattcagcagcagcatcatcgtgttttgttttttgttttgt 627

                                                                       
Query: 428 ttttttt-cctttgatgaaatacattattactactatgttcttcgtaatggaatgtccag 486
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttttttttcctttgatgaaatacattattactactatgttcttcgtaatggaatgtccag 687

                                                                       
Query: 487 atttttgatttcttcatgtgtcatatgattcagataaattgtgtgcagtgtgtacatcct 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 atttttgatttcttcatgtgtcatatgattcagataaattgtgtgcagtgtgtacatcct 747

            
Query: 547 g 547
           |
Sbjct: 748 g 748


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)