Query= MSMg01no382_l24.b1 MSMg01no382_l24.b1 CHROMAT_FILE:
MSMg01no382_l24.b1 PHD_FILE: MSMg01no382_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:35 2005
(435 letters)
>mm_chr3_34090017_34090855
Length = 839
Score = 725 bits (375), Expect = 0.0
Identities = 418/435 (96%), Gaps = 6/435 (1%)
Strand = Plus / Plus
Query: 6 gaattctctttggtttctgaggaaagtgtctgaaccagatagctaacctcacacagaagc 65
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 206 gaattctctttggcagctgaggaaagtgtctgagccagatagctaacctcacacagaagc 265
Query: 66 tcatctcttcaccgtcccccttctcactcttttcttcttccaggttatgctagatgctta 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcatctcttcaccgtcccccttctcactcttttcttcttccaggttatgctagatgctta 325
Query: 126 tggctaaaactacaagccaggaagcaacactgtcataggtttaaaaaaaatgatgataaa 185
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 326 tggctaaaactacaagccaggaagcaacactgtcataggttt-aaaaaaatgatgataaa 384
Query: 186 tgtataaaacacagtctactgttttaaccagtttcaactgtgcagcgtgtggtgtcacgt 245
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 385 tgtataaaacacagtctactgttttaaccagtttcaactgtgcagcgcgtggtgttacgt 444
Query: 246 ttacattctttggtagccaacaccctctccaaccccacccccagagagctttcattttga 305
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 ttacattctttggtagccagcaccctctccacccccacccccagagagctttcattttga 504
Query: 306 aaaactacaattacgtacccgtcattcaattccatttccttccttcttccagctcccagt 365
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 505 aaaactacaattacgtacccatcattcaactccatttccttccttcttccagcccccagt 564
Query: 366 aactacatatctccttcctgtttaggatgttcatgaatgtgaaggcatgc-----ccatc 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 565 aactacatatctccttcctgtttaggatgttcatgaatgtgaaggcatgctatacccatc 624
Query: 421 cttgtatgtatgcac 435
|||||||||||||||
Sbjct: 625 cttgtatgtatgcac 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 839
Length adjustment: 9
Effective length of query: 426
Effective length of database: 830
Effective search space: 353580
Effective search space used: 353580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_l24.g1 MSMg01no382_l24.g1 CHROMAT_FILE:
MSMg01no382_l24.g1 PHD_FILE: MSMg01no382_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:35 2005
(336 letters)
>mm_chr3_34233988_34234726
Length = 739
Score = 601 bits (311), Expect = e-176
Identities = 331/339 (97%), Gaps = 3/339 (0%)
Strand = Plus / Minus
Query: 1 aggtttggaatatgatatgttttattatgttctgtgttgcttttagtttttacattacag 60
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 539 aggtttggaatatgatatgttttactatgttctgtgttgcttttaggttttacattacag 480
Query: 61 attgtttaaacgacctcccagtaacaagaaaagcatgctacttttgacctgtatggacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 attgtttaaacgacctcccagtaacaagaaaagcatgctacttttgacctgtatggacat 420
Query: 121 ttgagcccttctatatccacaacacg---gttggaagcccctggtttagctgagaagctg 177
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 419 ttgagcccttctacatccacaacacggttgttggaagcccctggtttagctgagaagctg 360
Query: 178 tgtatagtgccttctcctcttcttcctctcttcatccacgacccagcttttctgttcctc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgtatagtgccttctcctcttcttcctctcttcatccacgacccagcttttctgttcctc 300
Query: 238 tgagcctatttcttttgggtgtgacagtggcaggagcagggcgcgacacaatgtttgtgt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgagcctatttcttttgggtgtgacagtggcaggagcagggcgcgacacaatgtttgtgt 240
Query: 298 cctgttggtgactcactgcggaaccatgtaaaaggaatg 336
||||||||||||||||||| |||||||| ||||||||||
Sbjct: 239 cctgttggtgactcactgcagaaccatggaaaaggaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 739
Length adjustment: 9
Effective length of query: 327
Effective length of database: 730
Effective search space: 238710
Effective search space used: 238710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
