Query= MSMg01no382_p07.b1 MSMg01no382_p07.b1 CHROMAT_FILE:
MSMg01no382_p07.b1 PHD_FILE: MSMg01no382_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:51 2005
(571 letters)
>mm_chr3_158030700_158031671
Length = 972
Score = 667 bits (345), Expect = 0.0
Identities = 357/361 (98%), Gaps = 1/361 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaccgatttccgttagaagggcagtgattgatggaataccagtttcttatttgt 63
||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaattcaccgatttgagtttgaagggcagtgattgatggaataccagtttcttatttgt 302
Query: 64 actcctttgaattaaatccattgagtaaactaatc-ttttttttaatcctgcattttaga 122
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 actcctttgaattaaatccattgagtaaactaatctttttttttaatcctgcattttaga 242
Query: 123 agatatcattcttgtttttcccccaatggcatttttcctttttattcttttattgaaaat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatatcattcttgtttttcccccaatggcatttttcctttttattcttttattgaaaat 182
Query: 183 agattcttttctcataaaacttatcatgattataattttttaatctctttctatttctcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agattcttttctcataaaacttatcatgattataattttttaatctctttctatttctcc 122
Query: 243 caattcctccaaattccctcccctttggaaccacttcccttctgtcactcatcagataag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caattcctccaaattccctcccctttggaaccacttcccttctgtcactcatcagataag 62
Query: 303 tcttctaagagataacaaccaaacaagacaaaattaaataaaatacaatgaaacataaac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttctaagagataacaaccaaacaagacaaaattaaataaaatacaatgaaacataaac 2
Query: 363 t 363
|
Sbjct: 1 t 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 972
Length adjustment: 10
Effective length of query: 561
Effective length of database: 962
Effective search space: 539682
Effective search space used: 539682
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_p07.g1 MSMg01no382_p07.g1 CHROMAT_FILE:
MSMg01no382_p07.g1 PHD_FILE: MSMg01no382_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:51 2005
(418 letters)
>mm_chr3_157831836_157832653
Length = 818
Score = 727 bits (376), Expect = 0.0
Identities = 404/418 (96%), Gaps = 8/418 (1%)
Strand = Plus / Plus
Query: 1 actcagggttaggttttcataaccacagtgctacaaagggtgttgagtgtgattccatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 actcagggttaggttttcataaccacagtgctacaaagggtgttgagtgtgattccatga 268
Query: 61 aatttaaatacaaagggtgtgtgtgtgtgtgtgtgtgtgtgcatgtgtgtacacgtgcac 120
|||||||||||||||||| |||||| ||||| ||| |||||||||||||||||
Sbjct: 269 aatttaaatacaaagggtatgtgtgcgtgtgcgtg--------tgtgtgtacacgtgcac 320
Query: 121 gcatgcacatgcgtgcgacttgctgaattctgctttctgtcctacttgtactattgtact 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcgtgcacatgcgtgcgacttgctgaattctgctttctgtcctacttgtactattgtact 380
Query: 181 atcttagatggaagactgtgactttgctttgatatgtgtggttatcatgtgaagaagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcttagatggaagactgtgactttgctttgatatgtgtggttatcatgtgaagaagaga 440
Query: 241 ccacagtggtacttgtaaggcaaggaaaaaaacctaaactgcagatttactttatcctcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccacagtggtacttgtaaggcaaggaaaaaaacctaaactgcagatttactttatcctcg 500
Query: 301 gaaactccaggtttcatttccataaaagtgaaagtatgcttctcttttgtgtggatttgc 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaactccaggtttcatttccgtaaaagtgaaagtatgcttctcttttgtgtggatttgc 560
Query: 361 gttttataactatgacttttttgttttgttcttacaatagggcctcactctgtatcca 418
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttctataactatgacttttttgttttgttcttacaatagggcctcactctgtatcca 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
